用于鉴定针对钩端螺旋体病的潜在交叉反应肽的表位定位。

IF 2.4 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Vibhisha Vaghasia, Kumari Snehkant Lata, Saumya Patel, Jayashankar Das
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引用次数: 0

摘要

钩端螺旋体是一种新型人畜共患疾病,在宿主中具有有效的传播策略,可感染患有中度或重度疾病的人类和动物。因此,基于肽的疫苗可能是管理针对钩端螺旋体的免疫反应以缩小这些差距的最有效策略。在目前的研究中,使用免疫信息学方法鉴定了来自体间钩端螺旋体(Leptospira interorgan)血清群伊特罗出血血清型赖毒株56601的蛋白质组的高度免疫原性蛋白质。通过检测15个线性B细胞和10个最佳T细胞(具有最显著数量的HLA-DR结合等位基因和8个细胞毒性T淋巴细胞(CTL))表位的辅助淋巴细胞(HTL),发现保守且最具免疫原性的外膜Lepin蛋白具有抗原性和非致敏性。此外,使用Pep-Fold3平台创建了CTL表位的3D结构模型。使用Autodock 4.2对接服务器,进行研究以确定排名靠前的CTL肽模型与HLA-A*0201(PDB ID:4U6Y)的结合程度。对于HLA-A*0201,表位SSGTGNLHV以-1.29的结合能结合 kcal/mol。利用分子动力学模型,对所投影的表位等位基因对接的复合物结构进行了优化,并对复合物系统的稳定性进行了评估。因此,该表位可以引发免疫反应并产生有效的钩端螺旋体候选疫苗。总的来说,这项研究提供了一种独特的候选疫苗,并可能鼓励对钩端螺旋体病疫苗进行更多的研究。Ramaswamy H.Sarma通讯。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Epitopes mapping for identification of potential cross-reactive peptide against leptospirosis.

Leptospira, the pathogenic helical spirochetes that cause leptospirosis, is an emerging zoonotic disease with effective dissemination tactics in the host and can infect humans and animals with moderate or severe illnesses. Thus, peptide-based vaccines may be the most effective strategy to manage the immune response against Leptospira to close these gaps. In the current investigation, highly immunogenic proteins from the proteome of Leptospira interorgan serogroup Icterohaemorrhagie serovar Lai strain 56601 were identified using immunoinformatic methods. It was discovered that the conserved and most immunogenic outer membrane Lepin protein was both antigenic and non-allergenic by testing 15 linear B-cells and the ten best T-cell (Helper-lymphocyte (HTL) with the most significant number of HLA-DR binding alleles and the eight cytotoxic T lymphocyte (CTL)) epitopes. Furthermore, a 3D structural model of CTL epitopes was created using the Pep-Fold3 platform. Using the Autodock 4.2 docking server, research was conducted to determine how well the top-ranked CTL peptide models attach to HLA-A*0201 (PDB ID: 4U6Y). With HLA-A*0201, the epitope SSGTGNLHV binds with a binding energy of -1.29 kcal/mol. Utilizing molecular dynamics modeling, the projected epitope-allele docked complex structure was optimized, and the stability of the complex system was assessed. Therefore, this epitope can trigger an immunological response and produce effective Leptospira vaccine candidates. Overall, this study offers a unique vaccination candidate and may encourage additional research into leptospirosis vaccines.Communicated by Ramaswamy H. Sarma.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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