头颈部鳞状细胞癌中竞争性内源性RNA的研究进展。

IF 2.5 3区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Avantika Agrawal, Vaibhav Vindal
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引用次数: 0

摘要

我们对RNA生物学的理解随着研究的最新进展而发展,从一种非功能性产物到具有特定调节功能的基因组分子。竞争性内源性RNA(ceRNA)就是这样一个例子,随着时间的推移,它作为转录后调控机制的重要组成部分而日益突出。ceRNA生物学假说指出,编码RNA和非编码RNA利用微小RNA(miRNA)反应元件相互协同调节。ceRNA成分包括长的非编码RNA、假基因和环状RNA,它们通过与miRNA相互作用发挥作用并调节其靶基因的表达水平。新出现的证据表明,ceRNA网络的失调可归因于各种癌症的发病机制,包括头颈部鳞状细胞癌(HNSCC)。这是最常见的癌症,由唇、口腔、喉部和咽部的粘膜上皮发展而来。尽管已经做出了许多努力来理解HNSCC的病因和随后的治疗,但发病率和死亡率仍然很高。因此,迫切需要了解由ceRNA介导的HNSCC的整体进展,这在确定具有明确治疗干预的新生物标志物方面具有巨大的相关性。在这篇综述中,我们努力强调ceRNA生物学假说,重点关注其在HNSCC进展中的作用。为了识别这种ceRNA,我们还强调了一些数据库和工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Competing endogenous RNAs in head and neck squamous cell carcinoma: a review.

Our understanding of RNA biology has evolved with recent advances in research from it being a non-functional product to molecules of the genome with specific regulatory functions. Competitive endogenous RNA (ceRNA), which has gained prominence over time as an essential part of post-transcriptional regulatory mechanism, is one such example. The ceRNA biology hypothesis states that coding RNA and non-coding RNA co-regulate each other using microRNA (miRNA) response elements. The ceRNA components include long non-coding RNAs, pseudogene and circular RNAs that exert their effect by interacting with miRNA and regulate the expression level of its target genes. Emerging evidence has revealed that the dysregulation of the ceRNA network is attributed to the pathogenesis of various cancers, including the head and neck squamous cell carcinoma (HNSCC). This is the most prevalent cancer developed from the mucosal epithelium in the lip, oral cavity, larynx and pharynx. Although many efforts have been made to comprehend the cause and subsequent treatment of HNSCC, the morbidity and mortality rate remains high. Hence, there is an urgent need to understand the holistic progression of HNSCC, mediated by ceRNA, that can have immense relevance in identifying novel biomarkers with a defined therapeutic intervention. In this review, we have made an effort to highlight the ceRNA biology hypothesis with a focus on its involvement in the progression of HNSCC. For the identification of such ceRNAs, we have additionally highlighted a number of databases and tools.

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来源期刊
Briefings in Functional Genomics
Briefings in Functional Genomics BIOTECHNOLOGY & APPLIED MICROBIOLOGY-GENETICS & HEREDITY
CiteScore
6.30
自引率
2.50%
发文量
37
审稿时长
6-12 weeks
期刊介绍: Briefings in Functional Genomics publishes high quality peer reviewed articles that focus on the use, development or exploitation of genomic approaches, and their application to all areas of biological research. As well as exploring thematic areas where these techniques and protocols are being used, articles review the impact that these approaches have had, or are likely to have, on their field. Subjects covered by the Journal include but are not restricted to: the identification and functional characterisation of coding and non-coding features in genomes, microarray technologies, gene expression profiling, next generation sequencing, pharmacogenomics, phenomics, SNP technologies, transgenic systems, mutation screens and genotyping. Articles range in scope and depth from the introductory level to specific details of protocols and analyses, encompassing bacterial, fungal, plant, animal and human data. The editorial board welcome the submission of review articles for publication. Essential criteria for the publication of papers is that they do not contain primary data, and that they are high quality, clearly written review articles which provide a balanced, highly informative and up to date perspective to researchers in the field of functional genomics.
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