Diariatou Niang, Abdellatif Gueddou, Nogaye Niang, Darius Nzepang, Aissatou Sambou, Adama Diouf, Arlette Z Zaiya, Maimouna Cissoko, Djamel Gully, Joel-Romaric Nguepjop, Sergio Svistoonoff, Daniel Fonceka, Valérie Hocher, Diégane Diouf, Saliou Fall, Louis S Tisa
{"title":"从塞内加尔花生种植区分离的优质固氮细菌慢生根瘤菌ISRA 400菌株的永久基因组序列草案。","authors":"Diariatou Niang, Abdellatif Gueddou, Nogaye Niang, Darius Nzepang, Aissatou Sambou, Adama Diouf, Arlette Z Zaiya, Maimouna Cissoko, Djamel Gully, Joel-Romaric Nguepjop, Sergio Svistoonoff, Daniel Fonceka, Valérie Hocher, Diégane Diouf, Saliou Fall, Louis S Tisa","doi":"10.7150/jgen.88302","DOIUrl":null,"url":null,"abstract":"<p><p>A new <i>Bradyrhizobium vignae</i> strain called ISRA400 was isolated from groundnut (<i>Arachis hypogaea</i> L.) root nodules obtained by trapping the bacteria from soil samples collected in the Senegalese groundnut basin. In this study, we present the draft genome sequence of this strain ISRA400, which spans approximatively 7.9 Mbp and exhibits a G+C content of 63.4%. The genome analysis revealed the presence of 48 tRNA genes and one rRNA operon (16S, 23S, and 5S). The nodulation test revealed that this strain ISRA400 significantly improves the nodulation parameters and chlorophyll content of the <i>Arachis hypogaea</i> variety Fleur11. These findings suggest the potential of <i>Bradyrhizobium vignae</i> strain ISRA400 as an effective symbiotic partner for improving the growth and productivity of groundnut crop.</p>","PeriodicalId":15834,"journal":{"name":"Journal of Genomics","volume":"11 ","pages":"52-57"},"PeriodicalIF":0.0000,"publicationDate":"2023-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10615618/pdf/","citationCount":"0","resultStr":"{\"title\":\"Permanent draft genome sequence of <i>Bradyrhizobium vignae,</i> strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal.\",\"authors\":\"Diariatou Niang, Abdellatif Gueddou, Nogaye Niang, Darius Nzepang, Aissatou Sambou, Adama Diouf, Arlette Z Zaiya, Maimouna Cissoko, Djamel Gully, Joel-Romaric Nguepjop, Sergio Svistoonoff, Daniel Fonceka, Valérie Hocher, Diégane Diouf, Saliou Fall, Louis S Tisa\",\"doi\":\"10.7150/jgen.88302\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>A new <i>Bradyrhizobium vignae</i> strain called ISRA400 was isolated from groundnut (<i>Arachis hypogaea</i> L.) root nodules obtained by trapping the bacteria from soil samples collected in the Senegalese groundnut basin. In this study, we present the draft genome sequence of this strain ISRA400, which spans approximatively 7.9 Mbp and exhibits a G+C content of 63.4%. The genome analysis revealed the presence of 48 tRNA genes and one rRNA operon (16S, 23S, and 5S). The nodulation test revealed that this strain ISRA400 significantly improves the nodulation parameters and chlorophyll content of the <i>Arachis hypogaea</i> variety Fleur11. These findings suggest the potential of <i>Bradyrhizobium vignae</i> strain ISRA400 as an effective symbiotic partner for improving the growth and productivity of groundnut crop.</p>\",\"PeriodicalId\":15834,\"journal\":{\"name\":\"Journal of Genomics\",\"volume\":\"11 \",\"pages\":\"52-57\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10615618/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Genomics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.7150/jgen.88302\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2023/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Genomics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.7150/jgen.88302","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
Permanent draft genome sequence of Bradyrhizobium vignae, strain ISRA 400, an elite nitrogen-fixing bacterium, isolated from the groundnut growing area in Senegal.
A new Bradyrhizobium vignae strain called ISRA400 was isolated from groundnut (Arachis hypogaea L.) root nodules obtained by trapping the bacteria from soil samples collected in the Senegalese groundnut basin. In this study, we present the draft genome sequence of this strain ISRA400, which spans approximatively 7.9 Mbp and exhibits a G+C content of 63.4%. The genome analysis revealed the presence of 48 tRNA genes and one rRNA operon (16S, 23S, and 5S). The nodulation test revealed that this strain ISRA400 significantly improves the nodulation parameters and chlorophyll content of the Arachis hypogaea variety Fleur11. These findings suggest the potential of Bradyrhizobium vignae strain ISRA400 as an effective symbiotic partner for improving the growth and productivity of groundnut crop.
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Journal of Genomics publishes papers of high quality in all areas of gene, genetics, genomics, proteomics, metabolomics, DNA/RNA, computational biology, bioinformatics, and other relevant areas of research and application. Articles published by the journal are rigorously peer-reviewed. Types of articles include: Research paper, Short research communication, Review or mini-reviews, Commentary, Database, Software.
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