用于酶系统上超极化13C磁共振实验的机理分析的扩展Bloch-McConnell方程。

Q3 Physics and Astronomy
Magnetic resonance (Gottingen, Germany) Pub Date : 2021-06-15 eCollection Date: 2021-01-01 DOI:10.5194/mr-2-421-2021
Thomas R Eykyn, Stuart J Elliott, Philip W Kuchel
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引用次数: 0

摘要

我们描述了一种在反应(生物)化学系统中建立NMR信号时间演化的动力学主方程的方法。特别关注的是采用信号增强(超极化)方法的研究,如溶解动态核极化(dDNP),并涉及进行由酶和膜转运蛋白介导的反应的核自旋溶质。我们扩展了最近关于该主题的报告(Kuchel和Shishmarev,2020)中给出的工作,现在包括具有两种或两种以上底物的酶和Cleland分类的各种酶反应机制,特别是非一级过程。使用这种方法,我们可以从理论角度解决该领域的一些紧迫问题。例如,为什么超极化底物与酶的结合不会导致底物或产物的信号明显损失?为什么未标记的底物池(例如12C-乳酸盐)的浓度会导致13C-标记池的交换速率增加?在给药底物期间,反应的平衡位置在多大程度上受到干扰?形式主义提供了对所推导的时间过程的完全机械理解,并且与使用这些技术进行的临床试验相关。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Extended Bloch-McConnell equations for mechanistic analysis of hyperpolarized <sup>13</sup>C magnetic resonance experiments on enzyme systems.

Extended Bloch-McConnell equations for mechanistic analysis of hyperpolarized <sup>13</sup>C magnetic resonance experiments on enzyme systems.

Extended Bloch-McConnell equations for mechanistic analysis of hyperpolarized <sup>13</sup>C magnetic resonance experiments on enzyme systems.

Extended Bloch-McConnell equations for mechanistic analysis of hyperpolarized 13C magnetic resonance experiments on enzyme systems.

We describe an approach to formulating the kinetic master equations of the time evolution of NMR signals in reacting (bio)chemical systems. Special focus is given to studies that employ signal enhancement (hyperpolarization) methods such as dissolution dynamic nuclear polarization (dDNP) and involving nuclear spin-bearing solutes that undergo reactions mediated by enzymes and membrane transport proteins. We extend the work given in a recent presentation on this topic (Kuchel and Shishmarev, 2020) to now include enzymes with two or more substrates and various enzyme reaction mechanisms as classified by Cleland, with particular reference to non-first-order processes. Using this approach, we can address some pressing questions in the field from a theoretical standpoint. For example, why does binding of a hyperpolarized substrate to an enzyme not cause an appreciable loss of the signal from the substrate or product? Why does the concentration of an unlabelled pool of substrate, for example 12C lactate, cause an increase in the rate of exchange of the 13C-labelled pool? To what extent is the equilibrium position of the reaction perturbed during administration of the substrate? The formalism gives a full mechanistic understanding of the time courses derived and is of relevance to ongoing clinical trials using these techniques.

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来源期刊
CiteScore
4.50
自引率
0.00%
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审稿时长
14 weeks
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