时变VAR模型的平滑在线参数估计及其在大鼠局部场电位活度数据中的应用。

IF 0.3 4区 数学 Q4 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Statistics and Its Interface Pub Date : 2023-01-01 Epub Date: 2023-04-13 DOI:10.4310/22-sii729
Anass El Yaagoubi Bourakna, Marco Pinto, Norbert Fortin, Hernando Ombao
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引用次数: 0

摘要

多元时间序列数据通常表现为非平稳过程的实现,其中协方差矩阵或谱矩阵随时间平滑演变。目前的大多数方法只能回顾性地估计随时间变化的光谱特性,也就是说,在观测到整个数据之后。在许多自适应控制应用中,回顾性评估是一个主要的限制,在这些应用中,评估这些属性并实时检测系统中的变化是很重要的。为了克服这一限制,我们开发了一种在线估计程序,当新的观测值到达时,可以实时更新时变参数。非平稳时间序列建模的一种方法是拟合时变向量自回归模型(tv-VAR)。然而,在线估计这些模型的一个主要障碍是由于参数的高维性而导致的计算成本。现有的卡尔曼滤波或局部最小二乘等方法是可行的。然而,它们并不总是合适的,因为它们提供了有噪声的估计,并且随着时间序列维度的增加,成本会变得过高。在我们的大脑信号应用中,开发一种鲁棒的方法来实时估计潜在随机过程的特性是至关重要的,特别是频谱大脑连接测量。基于这些原因,我们提出了一种新的平滑在线参数估计方法(SOPE),该方法能够在合理的计算复杂度下控制估计的平滑性。因此,即使对高维时间序列,该模型也能实时拟合。我们证明了我们提出的SOPE方法在小维度的均方误差方面与卡尔曼滤波一样好。然而,与卡尔曼滤波不同,SOPE具有较低的计算成本,因此可扩展到更高的维度。最后,我们将SOPE方法应用于执行气味序列记忆任务的大鼠海马的局部场电位活动数据。正如视频中所展示的那样,所提出的SOPE方法能够捕捉到大鼠在不同气味刺激下的连接动态。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Smooth online parameter estimation for time varying VAR models with application to rat local field potential activity data.

Multivariate time series data appear often as realizations of non-stationary processes where the covariance matrix or spectral matrix smoothly evolve over time. Most of the current approaches estimate the time-varying spectral properties only retrospectively - that is, after the entire data has been observed. Retrospective estimation is a major limitation in many adaptive control applications where it is important to estimate these properties and detect changes in the system as they happen in real-time. To overcome this limitation, we develop an online estimation procedure that gives a real-time update of the time-varying parameters as new observations arrive. One approach to modeling non-stationary time series is to fit time-varying vector autoregressive models (tv-VAR). However, one major obstacle in online estimation of such models is the computational cost due to the high-dimensionality of the parameters. Existing methods such as the Kalman filter or local least squares are feasible. However, they are not always suitable because they provide noisy estimates and can become prohibitively costly as the dimension of the time series increases. In our brain signal application, it is critical to develop a robust method that can estimate, in real-time, the properties of the underlying stochastic process, in particular, the spectral brain connectivity measures. For these reasons we propose a new smooth online parameter estimation approach (SOPE) that has the ability to control for the smoothness of the estimates with a reasonable computational complexity. Consequently, the models are fit in real-time even for high dimensional time series. We demonstrate that our proposed SOPE approach is as good as the Kalman filter in terms of mean-squared error for small dimensions. However, unlike the Kalman filter, the SOPE has lower computational cost and hence scalable for higher dimensions. Finally, we apply the SOPE method to local field potential activity data from the hippocampus of a rat performing an odor sequence memory task. As demonstrated in the video, the proposed SOPE method is able to capture the dynamics of the connectivity as the rat samples the different odor stimuli.

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来源期刊
Statistics and Its Interface
Statistics and Its Interface MATHEMATICAL & COMPUTATIONAL BIOLOGY-MATHEMATICS, INTERDISCIPLINARY APPLICATIONS
CiteScore
0.90
自引率
12.50%
发文量
45
审稿时长
6 months
期刊介绍: Exploring the interface between the field of statistics and other disciplines, including but not limited to: biomedical sciences, geosciences, computer sciences, engineering, and social and behavioral sciences. Publishes high-quality articles in broad areas of statistical science, emphasizing substantive problems, sound statistical models and methods, clear and efficient computational algorithms, and insightful discussions of the motivating problems.
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