{"title":"巴厘牛催乳素和STAT5A基因的遗传变异","authors":"K. A. Paramitasari, C. Sumantri, Jakaria","doi":"10.5398/MEDPET.2015.38.1.1","DOIUrl":null,"url":null,"abstract":"The aim of this study was to identify the genetic variability of PRL and STAT5A genes in Bali cattle from Bali, West Nusa Tenggara (NTB), and South Sulawesi (SS) using PCR-RFLP method. A total of 262 Bali cattle were identified using Rsa I (PRL) and Ava I (STAT5A) restriction enzymes. PRL gene exon 3, PRL gene exon 4, and STAT5A gene exon 7 amplifications resulted fragments with the lengths of 156 bp, 294 bp, 215 bp, respectively. Genotyping of PRL gene both at exon 3 and 4 produced three genotypes in Bali population and two genotypes in NTB and SS population. For the PRL gene, frequencies of A allele (exon 3) and G allele (exon 4) were dominant to the B allele (exon 3) and A allele (exon 4) across all populations. The results showed that STAT5A| Ava I loci had monomorphic C allele. Heterozygosity values were found low at both exons 3 and 4 of PRL gene in all population. Sequence analysis results of PRL gene both for exons 3 and 4 showed that there was a mutation between adenine (A) and guanine (G) bases in the Rsa I recognized site, whereas in STAT5A gene we can confirm the existence of Ava I restriction site (C|CCGAG). Key words: bali cattle, genetic polymorphism, PCR-RFLP, prolactin gene, STAT5A gene","PeriodicalId":18346,"journal":{"name":"Media Peternakan","volume":"38 1","pages":"1-11"},"PeriodicalIF":0.0000,"publicationDate":"2015-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.5398/MEDPET.2015.38.1.1","citationCount":"7","resultStr":"{\"title\":\"The Genetic Variability of Prolactin and Signal Transducers and Activators of Transcription 5A (STAT5A) Genes in Bali Cattle\",\"authors\":\"K. A. Paramitasari, C. Sumantri, Jakaria\",\"doi\":\"10.5398/MEDPET.2015.38.1.1\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The aim of this study was to identify the genetic variability of PRL and STAT5A genes in Bali cattle from Bali, West Nusa Tenggara (NTB), and South Sulawesi (SS) using PCR-RFLP method. A total of 262 Bali cattle were identified using Rsa I (PRL) and Ava I (STAT5A) restriction enzymes. PRL gene exon 3, PRL gene exon 4, and STAT5A gene exon 7 amplifications resulted fragments with the lengths of 156 bp, 294 bp, 215 bp, respectively. Genotyping of PRL gene both at exon 3 and 4 produced three genotypes in Bali population and two genotypes in NTB and SS population. For the PRL gene, frequencies of A allele (exon 3) and G allele (exon 4) were dominant to the B allele (exon 3) and A allele (exon 4) across all populations. The results showed that STAT5A| Ava I loci had monomorphic C allele. Heterozygosity values were found low at both exons 3 and 4 of PRL gene in all population. Sequence analysis results of PRL gene both for exons 3 and 4 showed that there was a mutation between adenine (A) and guanine (G) bases in the Rsa I recognized site, whereas in STAT5A gene we can confirm the existence of Ava I restriction site (C|CCGAG). Key words: bali cattle, genetic polymorphism, PCR-RFLP, prolactin gene, STAT5A gene\",\"PeriodicalId\":18346,\"journal\":{\"name\":\"Media Peternakan\",\"volume\":\"38 1\",\"pages\":\"1-11\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2015-03-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.5398/MEDPET.2015.38.1.1\",\"citationCount\":\"7\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Media Peternakan\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.5398/MEDPET.2015.38.1.1\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Media Peternakan","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.5398/MEDPET.2015.38.1.1","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 7
摘要
本研究旨在利用PCR-RFLP方法,鉴定来自巴厘、西努沙登加拉(NTB)和南苏拉威西(SS)的巴厘牛PRL和STAT5A基因的遗传变异。利用Rsa I (PRL)和Ava I (STAT5A)限制性内切酶对262头巴厘牛进行了鉴定。PRL基因外显子3、PRL基因外显子4和STAT5A基因外显子7扩增得到的片段长度分别为156 bp、294 bp和215 bp。PRL基因外显子3和4的基因分型在Bali群体中得到3个基因型,在NTB和SS群体中得到2个基因型。对于PRL基因,在所有种群中,A等位基因(外显子3)和G等位基因(外显子4)的频率优于B等位基因(外显子3)和A等位基因(外显子4)。结果表明,STAT5A| Ava I位点具有单态C等位基因。PRL基因外显子3和4杂合度均较低。PRL基因外显子3和4的序列分析结果显示,在Rsa I识别位点存在腺嘌呤(a)和鸟嘌呤(G)碱基突变,而在STAT5A基因中,我们可以确认Ava I限制位点(C|CCGAG)的存在。关键词:巴厘牛,遗传多态性,PCR-RFLP,催乳素基因,STAT5A基因
The Genetic Variability of Prolactin and Signal Transducers and Activators of Transcription 5A (STAT5A) Genes in Bali Cattle
The aim of this study was to identify the genetic variability of PRL and STAT5A genes in Bali cattle from Bali, West Nusa Tenggara (NTB), and South Sulawesi (SS) using PCR-RFLP method. A total of 262 Bali cattle were identified using Rsa I (PRL) and Ava I (STAT5A) restriction enzymes. PRL gene exon 3, PRL gene exon 4, and STAT5A gene exon 7 amplifications resulted fragments with the lengths of 156 bp, 294 bp, 215 bp, respectively. Genotyping of PRL gene both at exon 3 and 4 produced three genotypes in Bali population and two genotypes in NTB and SS population. For the PRL gene, frequencies of A allele (exon 3) and G allele (exon 4) were dominant to the B allele (exon 3) and A allele (exon 4) across all populations. The results showed that STAT5A| Ava I loci had monomorphic C allele. Heterozygosity values were found low at both exons 3 and 4 of PRL gene in all population. Sequence analysis results of PRL gene both for exons 3 and 4 showed that there was a mutation between adenine (A) and guanine (G) bases in the Rsa I recognized site, whereas in STAT5A gene we can confirm the existence of Ava I restriction site (C|CCGAG). Key words: bali cattle, genetic polymorphism, PCR-RFLP, prolactin gene, STAT5A gene