冠状病毒orf1ab衍生的Nsp9和nsp10非结构蛋白与S8/S10核糖体蛋白以及RlmG/ ermdrrname甲基转移酶具有同源性,并可能抑制宿主线粒体组装和蛋白质合成

A. Chakraborty
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引用次数: 1

摘要

多重比对方法结合系统发育分析揭示了冠状病毒asrRNARlmH/K甲基转移酶的Nsp9和Nsp10非结构蛋白与bin重组酶和intcore整合酶折叠相似。此外,Nsp9与S8核糖体蛋白具有相似性,Nap10与S10核糖体蛋白具有相似性。之前,我们发现Nsp13, Nsp14, Nsp15和Nsp16也是不同类型的rRNARlmE/N和cfr样甲基转移酶-具有RNA解旋酶结构域的核糖核酸酶。Nsp13的两个结构域与核糖体蛋白L6和L9惊人地相似。综上所述,Nsp9/10和Nsp13-16蛋白可以模拟宿主核糖体的组装,也可以甲基化线粒体核糖体的rRNA,阻止线粒体蛋白的合成和氧化磷酸化。低ATP合成导致昏迷后血压降低,但非常高的ATP浓度(1-10nM)肯定会通过vWA、胶原蛋白和GpIIb/ iii蛋白诱导血小板聚集,随后是纤维蛋白形成和血液凝固,最近在许多冠状病毒感染患者的肺部观察到这一点。我们还假设两种多蛋白本身类似于28S和38S核糖体亚基,由于它们与许多核糖体蛋白相似,因此与抑制核糖体周转和新蛋白合成的rnas竞争。这一发现可能对基于计算机的新型冠状病毒药物设计有价值。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Corona Virus ORF1ab-Derived Nsp9 and Nsp10Non-Structural Proteins have Homologies to S8/S10 Ribosomal Proteins as well as RlmG/ ErmDrRNAMethyltransferasesand may Inhibit Host Mitoribosome Assembly and Protein Synthesis
Multi-Alignment method coupled with phylogenetic analysis we disclosed the Nsp9 and Nsp10 non-structural proteins of Corona Virus asrRNARlmH/K methyltransferases with similarities with bin recombinase and int-core integrase fold. Further, Nsp9 has similarities to S8 ribosomal protein and Nap10 has similarity to S10 ribosomal protein. Previously, we showed Nsp13, Nsp14, Nsp15 and Nsp16 are also different types of rRNARlmE/N and Cfr-like methyltransferases-ribonucleasewith RNA helicase domains. Two domains of Nsp13 astonishingly have similarities to ribosomal proteins L6 and L9. Taken together, Nsp9/10 and Nsp13-16 proteins could mimic host ribosome assembly and also could methylate rRNA of mitobibosome preventing mitochondrial protein synthesis and oxidative phosphorylation. Low ATP synthesis causes lowering blood pressure following coma but very ATP concentration (1-10nM) surely induces platelets aggregation through vWA, collagen and GpIIb/IIIaproteins followed byfibrin formation and blood clotting as recently have seen in the lung of many Corona virus infected patients. We have also postulated that two polyproteins itself resemble like 28S and 38S mitoribosome subunits and compete with rRNAs inhibiting the ribosome turnover and new protein synthesis due to their similarities with many ribosomal proteins.Such finding may be valuable in computer-based novel drug design against Corona virus.
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