甘薯不定根特异性基因表达启动子的鉴定

IF 1 Q3 PLANT SCIENCES
Plant Root Pub Date : 2018-01-01 DOI:10.3117/PLANTROOT.12.31
N. Tanabe, Akane Ito, M. Tamoi, S. Shigeoka
{"title":"甘薯不定根特异性基因表达启动子的鉴定","authors":"N. Tanabe, Akane Ito, M. Tamoi, S. Shigeoka","doi":"10.3117/PLANTROOT.12.31","DOIUrl":null,"url":null,"abstract":"Since sweet potato (Ipomoea batatas) produces high yield of storage roots (SR), it is an attractive target for improving productivity. However, molecular information about sweet potato is limited. The number of SR per plants determines the yield of sweet potato. SRs develop from adventitious roots (AR). Therefore, the mechanisms responsible for the initiation and development of AR need to be elucidated to increase the productivity of sweet potato. We conducted a transcriptomic analysis between nodes containing AR primordia (ARnode) and stems using next-generation sequencing to identify AR-specific promoters. A total of 6,219 contigs exhibited stronger expression in the ARnodes than in the stems. Among them, we found that the expression of sweet potato Plant AT-rich sequenceand zinc-binding protein (IbPLATZ) transcription factors was AR-specific. We examined the promoter activity of IbPLATZ in the transgenic Arabidopsis plants. β-glucuronidase (GUS) staining showed that the IbPLATZ promoter conferred the expression of the GUS reporter gene in a root tipspecific manner. These results indicate that the IbPLATZ promoter is available for a root tip-specific foreign gene expression system in transgenic plants.","PeriodicalId":20205,"journal":{"name":"Plant Root","volume":null,"pages":null},"PeriodicalIF":1.0000,"publicationDate":"2018-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3117/PLANTROOT.12.31","citationCount":"1","resultStr":"{\"title\":\"Identification of promoter for adventitious root-specific gene expression from sweet potato\",\"authors\":\"N. Tanabe, Akane Ito, M. Tamoi, S. Shigeoka\",\"doi\":\"10.3117/PLANTROOT.12.31\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Since sweet potato (Ipomoea batatas) produces high yield of storage roots (SR), it is an attractive target for improving productivity. However, molecular information about sweet potato is limited. The number of SR per plants determines the yield of sweet potato. SRs develop from adventitious roots (AR). Therefore, the mechanisms responsible for the initiation and development of AR need to be elucidated to increase the productivity of sweet potato. We conducted a transcriptomic analysis between nodes containing AR primordia (ARnode) and stems using next-generation sequencing to identify AR-specific promoters. A total of 6,219 contigs exhibited stronger expression in the ARnodes than in the stems. Among them, we found that the expression of sweet potato Plant AT-rich sequenceand zinc-binding protein (IbPLATZ) transcription factors was AR-specific. We examined the promoter activity of IbPLATZ in the transgenic Arabidopsis plants. β-glucuronidase (GUS) staining showed that the IbPLATZ promoter conferred the expression of the GUS reporter gene in a root tipspecific manner. These results indicate that the IbPLATZ promoter is available for a root tip-specific foreign gene expression system in transgenic plants.\",\"PeriodicalId\":20205,\"journal\":{\"name\":\"Plant Root\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.0000,\"publicationDate\":\"2018-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.3117/PLANTROOT.12.31\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plant Root\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3117/PLANTROOT.12.31\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Root","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3117/PLANTROOT.12.31","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 1

摘要

由于甘薯(Ipomoea batatas)储藏根(SR)产量高,它是一个有吸引力的提高生产力的目标。然而,关于红薯的分子信息有限。单株SR的多少决定了甘薯的产量。SRs由不定根(AR)发展而来。因此,为了提高甘薯的产量,需要阐明AR的产生和发展机制。我们利用下一代测序技术对含有AR原基(ARnode)的节点和茎进行了转录组学分析,以鉴定AR特异性启动子。6219个contigs在ARnodes中的表达强于在茎中的表达。其中,我们发现甘薯植物AT-rich sequenceand zinc-binding protein (IbPLATZ)转录因子的表达具有ar特异性。我们检测了转基因拟南芥植株中IbPLATZ启动子的活性。β-葡萄糖醛酸酶(GUS)染色表明IbPLATZ启动子以根尖特异性的方式赋予GUS报告基因的表达。这些结果表明IbPLATZ启动子可用于转基因植物根尖特异性外源基因的表达系统。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identification of promoter for adventitious root-specific gene expression from sweet potato
Since sweet potato (Ipomoea batatas) produces high yield of storage roots (SR), it is an attractive target for improving productivity. However, molecular information about sweet potato is limited. The number of SR per plants determines the yield of sweet potato. SRs develop from adventitious roots (AR). Therefore, the mechanisms responsible for the initiation and development of AR need to be elucidated to increase the productivity of sweet potato. We conducted a transcriptomic analysis between nodes containing AR primordia (ARnode) and stems using next-generation sequencing to identify AR-specific promoters. A total of 6,219 contigs exhibited stronger expression in the ARnodes than in the stems. Among them, we found that the expression of sweet potato Plant AT-rich sequenceand zinc-binding protein (IbPLATZ) transcription factors was AR-specific. We examined the promoter activity of IbPLATZ in the transgenic Arabidopsis plants. β-glucuronidase (GUS) staining showed that the IbPLATZ promoter conferred the expression of the GUS reporter gene in a root tipspecific manner. These results indicate that the IbPLATZ promoter is available for a root tip-specific foreign gene expression system in transgenic plants.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Plant Root
Plant Root PLANT SCIENCES-
CiteScore
1.50
自引率
0.00%
发文量
2
期刊介绍: Plant Root publishes original papers, either theoretical or experimental, that provide novel insights into plant roots. The Journal’s subjects include, but are not restricted to, anatomy and morphology, cellular and molecular biology, biochemistry, physiology, interactions with soil, mineral nutrients, water, symbionts and pathogens, food culture, together with ecological, genetic and methodological aspects related to plant roots and rhizosphere. Work at any scale, from the molecular to the community level, is welcomed.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信