{"title":"筛选临床和基因表达数据的稀疏随机预测生存集合","authors":"Lifeng Zhou, Hong Wang, Qingsong Xu","doi":"10.2197/IPSJTBIO.9.18","DOIUrl":null,"url":null,"abstract":"Random projection is a powerful method for dimensionality reduction while its applications in highdimensional survival analysis is rather limited. In this research, we propose a novel survival ensemble model based on sparse random projection and survival trees. Supported by the proper statistical analysis, we show that the proposed model is comparable to or better than popular survival models such as random survival forest, regularized Cox proportional hazard and fast cocktail models on high-dimensional microarray gene expression right censored data.","PeriodicalId":38959,"journal":{"name":"IPSJ Transactions on Bioinformatics","volume":"9 1","pages":"18-23"},"PeriodicalIF":0.0000,"publicationDate":"2016-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.2197/IPSJTBIO.9.18","citationCount":"0","resultStr":"{\"title\":\"Survival Ensemble with Sparse Random Projections for Censored Clinical and Gene Expression Data\",\"authors\":\"Lifeng Zhou, Hong Wang, Qingsong Xu\",\"doi\":\"10.2197/IPSJTBIO.9.18\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Random projection is a powerful method for dimensionality reduction while its applications in highdimensional survival analysis is rather limited. In this research, we propose a novel survival ensemble model based on sparse random projection and survival trees. Supported by the proper statistical analysis, we show that the proposed model is comparable to or better than popular survival models such as random survival forest, regularized Cox proportional hazard and fast cocktail models on high-dimensional microarray gene expression right censored data.\",\"PeriodicalId\":38959,\"journal\":{\"name\":\"IPSJ Transactions on Bioinformatics\",\"volume\":\"9 1\",\"pages\":\"18-23\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2016-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.2197/IPSJTBIO.9.18\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"IPSJ Transactions on Bioinformatics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.2197/IPSJTBIO.9.18\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"IPSJ Transactions on Bioinformatics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.2197/IPSJTBIO.9.18","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
Survival Ensemble with Sparse Random Projections for Censored Clinical and Gene Expression Data
Random projection is a powerful method for dimensionality reduction while its applications in highdimensional survival analysis is rather limited. In this research, we propose a novel survival ensemble model based on sparse random projection and survival trees. Supported by the proper statistical analysis, we show that the proposed model is comparable to or better than popular survival models such as random survival forest, regularized Cox proportional hazard and fast cocktail models on high-dimensional microarray gene expression right censored data.