探讨中药优毒精软膏治疗宫颈癌的作用机制

IF 0.6 4区 生物学 Q4 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Lei Zhang, Jinli Lv, Ming Xiao, Li Yang, Le Zhang
{"title":"探讨中药优毒精软膏治疗宫颈癌的作用机制","authors":"Lei Zhang, Jinli Lv, Ming Xiao, Li Yang, Le Zhang","doi":"10.15302/j-qb-021-0236","DOIUrl":null,"url":null,"abstract":"Background: A traditional Chinese medicine formula, Youdujing (YDJ) ointment, is widely used for treatment of human papilloma virus-related diseases, such as cervical cancer. However, the underlying mechanisms by which active compounds of YDJ alleviates cervical cancer are still unclear. Methods: We applied a comprehensive network pharmacology approach to explore the key mechanisms of YDJ by integrating potential target identi fi cation, network analysis, and enrichment analysis into classical molecular docking procedures. First, we used network and enrichment analyses to identify potential therapeutic targets. Second, we performed molecular docking to investigate the potential active compounds of YDJ. Finally, we carried out a network-based analysis to unravel potentially effective drug combinations. Results: Network analysis yielded four potential therapeutic targets: ESR1, NFKB1, TNF, and AKT1. Molecular docking highlighted that these proteins may interact with four potential active compounds of YDJ: E4, Y2, Y20, and Y21. Finally, we found that Y2 or Y21 can act alone or together with E4 to trigger apoptotic cascades via the mitochondrial apoptotic pathway and estrogen receptors. Conclusion: Our study not only explained why YDJ is effective for cervical cancer treatment, but also lays a strong foundation for future clinical studies based on this traditional medicine. summary: mechanisms underlying the effect of remained unclear, so we developed a network pharmacology method to investigate the active compounds and their possible combinations by integrating network and enrichment analyses with molecular docking. In this paper, we found four potential active compounds and four potential therapeutic targets of YDJ. However, these fi ndings should be con fi rmed by further experiments in vitro and in vivo , whose results can be integrated in the present bioinformatic algorithm in order to optimize our method in the future.","PeriodicalId":45660,"journal":{"name":"Quantitative Biology","volume":"1 1","pages":""},"PeriodicalIF":0.6000,"publicationDate":"2021-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"6","resultStr":"{\"title\":\"Exploring the underlying mechanism of action of a traditional Chinese medicine formula, Youdujing ointment, for cervical cancer treatment\",\"authors\":\"Lei Zhang, Jinli Lv, Ming Xiao, Li Yang, Le Zhang\",\"doi\":\"10.15302/j-qb-021-0236\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Background: A traditional Chinese medicine formula, Youdujing (YDJ) ointment, is widely used for treatment of human papilloma virus-related diseases, such as cervical cancer. However, the underlying mechanisms by which active compounds of YDJ alleviates cervical cancer are still unclear. Methods: We applied a comprehensive network pharmacology approach to explore the key mechanisms of YDJ by integrating potential target identi fi cation, network analysis, and enrichment analysis into classical molecular docking procedures. First, we used network and enrichment analyses to identify potential therapeutic targets. Second, we performed molecular docking to investigate the potential active compounds of YDJ. Finally, we carried out a network-based analysis to unravel potentially effective drug combinations. Results: Network analysis yielded four potential therapeutic targets: ESR1, NFKB1, TNF, and AKT1. Molecular docking highlighted that these proteins may interact with four potential active compounds of YDJ: E4, Y2, Y20, and Y21. Finally, we found that Y2 or Y21 can act alone or together with E4 to trigger apoptotic cascades via the mitochondrial apoptotic pathway and estrogen receptors. Conclusion: Our study not only explained why YDJ is effective for cervical cancer treatment, but also lays a strong foundation for future clinical studies based on this traditional medicine. summary: mechanisms underlying the effect of remained unclear, so we developed a network pharmacology method to investigate the active compounds and their possible combinations by integrating network and enrichment analyses with molecular docking. In this paper, we found four potential active compounds and four potential therapeutic targets of YDJ. However, these fi ndings should be con fi rmed by further experiments in vitro and in vivo , whose results can be integrated in the present bioinformatic algorithm in order to optimize our method in the future.\",\"PeriodicalId\":45660,\"journal\":{\"name\":\"Quantitative Biology\",\"volume\":\"1 1\",\"pages\":\"\"},\"PeriodicalIF\":0.6000,\"publicationDate\":\"2021-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"6\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Quantitative Biology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.15302/j-qb-021-0236\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MATHEMATICAL & COMPUTATIONAL BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Quantitative Biology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.15302/j-qb-021-0236","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MATHEMATICAL & COMPUTATIONAL BIOLOGY","Score":null,"Total":0}
引用次数: 6

摘要

背景:优毒净软膏是一种中药方剂,被广泛用于治疗人乳头瘤病毒相关疾病,如宫颈癌。然而,YDJ活性化合物减轻宫颈癌的潜在机制尚不清楚。方法:采用综合网络药理学方法,将潜在靶点识别、网络分析和富集分析整合到经典的分子对接过程中,探索YDJ的关键机制。首先,我们使用网络和富集分析来确定潜在的治疗靶点。其次,我们对YDJ的潜在活性化合物进行了分子对接。最后,我们进行了基于网络的分析,以揭示潜在有效的药物组合。结果:网络分析得出四个潜在的治疗靶点:ESR1、NFKB1、TNF和AKT1。分子对接表明,这些蛋白可能与YDJ的四种潜在活性化合物E4、Y2、Y20和Y21相互作用。最后,我们发现Y2或Y21可以单独或与E4一起通过线粒体凋亡途径和雌激素受体触发凋亡级联反应。结论:我们的研究不仅解释了YDJ治疗宫颈癌有效的原因,也为今后基于该传统药物的临床研究奠定了坚实的基础。摘要:目前尚不清楚其作用机制,因此我们开发了一种网络药理学方法,将网络和富集分析与分子对接相结合,研究活性化合物及其可能的组合。在本文中,我们发现了4个潜在的活性化合物和4个潜在的治疗靶点。然而,这些发现还需要进一步的体外和体内实验来证实,这些实验的结果可以整合到目前的生物信息学算法中,以便在未来优化我们的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Exploring the underlying mechanism of action of a traditional Chinese medicine formula, Youdujing ointment, for cervical cancer treatment
Background: A traditional Chinese medicine formula, Youdujing (YDJ) ointment, is widely used for treatment of human papilloma virus-related diseases, such as cervical cancer. However, the underlying mechanisms by which active compounds of YDJ alleviates cervical cancer are still unclear. Methods: We applied a comprehensive network pharmacology approach to explore the key mechanisms of YDJ by integrating potential target identi fi cation, network analysis, and enrichment analysis into classical molecular docking procedures. First, we used network and enrichment analyses to identify potential therapeutic targets. Second, we performed molecular docking to investigate the potential active compounds of YDJ. Finally, we carried out a network-based analysis to unravel potentially effective drug combinations. Results: Network analysis yielded four potential therapeutic targets: ESR1, NFKB1, TNF, and AKT1. Molecular docking highlighted that these proteins may interact with four potential active compounds of YDJ: E4, Y2, Y20, and Y21. Finally, we found that Y2 or Y21 can act alone or together with E4 to trigger apoptotic cascades via the mitochondrial apoptotic pathway and estrogen receptors. Conclusion: Our study not only explained why YDJ is effective for cervical cancer treatment, but also lays a strong foundation for future clinical studies based on this traditional medicine. summary: mechanisms underlying the effect of remained unclear, so we developed a network pharmacology method to investigate the active compounds and their possible combinations by integrating network and enrichment analyses with molecular docking. In this paper, we found four potential active compounds and four potential therapeutic targets of YDJ. However, these fi ndings should be con fi rmed by further experiments in vitro and in vivo , whose results can be integrated in the present bioinformatic algorithm in order to optimize our method in the future.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Quantitative Biology
Quantitative Biology MATHEMATICAL & COMPUTATIONAL BIOLOGY-
CiteScore
5.00
自引率
3.20%
发文量
264
期刊介绍: Quantitative Biology is an interdisciplinary journal that focuses on original research that uses quantitative approaches and technologies to analyze and integrate biological systems, construct and model engineered life systems, and gain a deeper understanding of the life sciences. It aims to provide a platform for not only the analysis but also the integration and construction of biological systems. It is a quarterly journal seeking to provide an inter- and multi-disciplinary forum for a broad blend of peer-reviewed academic papers in order to promote rapid communication and exchange between scientists in the East and the West. The content of Quantitative Biology will mainly focus on the two broad and related areas: ·bioinformatics and computational biology, which focuses on dealing with information technologies and computational methodologies that can efficiently and accurately manipulate –omics data and transform molecular information into biological knowledge. ·systems and synthetic biology, which focuses on complex interactions in biological systems and the emergent functional properties, and on the design and construction of new biological functions and systems. Its goal is to reflect the significant advances made in quantitatively investigating and modeling both natural and engineered life systems at the molecular and higher levels. The journal particularly encourages original papers that link novel theory with cutting-edge experiments, especially in the newly emerging and multi-disciplinary areas of research. The journal also welcomes high-quality reviews and perspective articles.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信