通过系统生物学方法揭示急性心肌梗死和溃疡性结肠炎共发病之间的遗传联系

IF 0.9 4区 医学 Q4 CARDIAC & CARDIOVASCULAR SYSTEMS
Chen Chang, Ru-Ping Cai, Qiang Wu, Q. Su
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引用次数: 0

摘要

背景:心血管疾病,尤其是急性心肌梗死,是导致残疾和死亡的主要原因。动脉粥样硬化是AMI的病理基础,慢性炎症可加速其发生。溃疡性结肠炎(UC)是一种与免疫相关的慢性炎症性疾病,可增加AMI发展的风险。然而,围绕这两种疾病之间的关系,争议仍在继续。本研究揭示了AMI和UC的发病机制,为这些合并症患者的临床治疗提供了新的视角。方法:从Gene Expression Omnibus数据库下载微阵列数据集GSE66360和GSE87473。鉴定AMI和UC之间的共同差异表达基因(co-DEGs),并进行富集分析、蛋白-蛋白相互作用网络构建、枢纽基因鉴定和共表达分析。结果:共筛选出267个co-DEGs(233个上调,34个下调)进行进一步分析。GO富集分析提示趋化因子和细胞因子在AMI和UC中起重要作用。此外,脂多糖介导的信号通路被发现与这两种疾病密切相关。KEGG富集分析显示脂质和动脉粥样硬化、NF-κB、TNF和IL-17信号通路是参与这两种疾病进展的核心机制。最后,与cytoHubba共鉴定出11个枢纽基因:TNF、IL1B、TLR2、CXCL8、STAT3、MMP9、ITGAX、CCL4、CSF1R、ICAM1和CXCL1。结论:本研究揭示了AMI和UC受特定枢纽基因调控的共同发病机制,为进一步的机制研究提供思路,并为这些合并症患者的临床管理提供新的视角。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Uncovering the Genetic Link between Acute Myocardial Infarction and Ulcerative Colitis Co-Morbidity through a Systems Biology Approach
Background: Cardiovascular diseases, particularly acute myocardial infarction, are the leading cause of disability and death. Atherosclerosis, the pathological basis of AMI, can be accelerated by chronic inflammation. Ulcerative colitis (UC), a chronic inflammatory disease associated with immunity, contributes to the risk of AMI development. However, controversy continues to surround the relationship between these two diseases. The present study unravels the pathogenesis of AMI and UC, to provide a new perspective on the clinical management of patients with these comorbidities. Methods: Microarray datasets GSE66360 and GSE87473 were downloaded from the Gene Expression Omnibus database. Common differentially expressed genes (co-DEGs) between AMI and UC were identified, and the following analyses were performed: enrichment analysis, protein-protein interaction network construction, hub gene identification and co-expression analysis. Results: A total of 267 co-DEGs (233 upregulated and 34 downregulated) were screened for further analysis. GO enrichment analysis suggested important roles of chemokines and cytokines in AMI and UC. In addition, the lipopolysaccharide-mediated signaling pathway was found to be closely associated with both diseases. KEGG enrichment analysis revealed that lipid and atherosclerosis, NF-κB, TNF and IL-17 signaling pathways are the core mechanisms involved in the progression of both diseases. Finally, 11 hub genes were identified with cytoHubba: TNF, IL1B, TLR2, CXCL8, STAT3, MMP9, ITGAX, CCL4, CSF1R, ICAM1 and CXCL1. Conclusion: This study reveals a co-pathogenesis mechanism of AMI and UC regulated by specific hub genes, thus providing ideas for further mechanistic studies, and new perspectives on the clinical management of patients with these comorbidities.
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来源期刊
Cardiovascular Innovations and Applications
Cardiovascular Innovations and Applications CARDIAC & CARDIOVASCULAR SYSTEMS-
CiteScore
0.80
自引率
20.00%
发文量
222
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