Paperfetcher:一个自动手动搜索和引文搜索系统评论的工具

IF 5 2区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Akash Pallath, Qiyang Zhang
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引用次数: 7

摘要

系统评价是研究人员了解某一领域的广泛趋势和综合有关干预措施在解决具体问题方面有效性的证据的重要工具。系统综述的质量主要取决于对综述主题的所有相关文献进行全面调查。除了数据库检索之外,手工检索是一种重要的辅助技术,有助于增加在文献检索中识别所有相关研究的可能性。传统的手工检索要求审稿人手动浏览特定领域的期刊和会议记录,以找到与审稿主题相关的文章。这个手工过程不仅耗时、费力、昂贵,而且由于人的疲劳而容易出错,而且由于其繁琐的手工性质,它还缺乏可复制性。为了解决这些问题,本文提供了一个免费的开源Python包和一个附带的web应用程序Paperfetcher,用于自动检索文章元数据以进行手工搜索。在Paperfetcher的帮助下,研究人员只需点击几下,就可以在指定的时间框架内从指定的期刊检索文章元数据。除了手工搜索,它还包含了一个测试版的引文搜索向前和向后的方向。Paperfetcher有一个易于使用的界面,它允许研究人员将检索到的研究元数据下载为doi列表或RIS文件,以便无缝导入系统评审筛选软件。据我们所知,Paperfetcher是第一个具有高可用性和多学科重点的自动手动搜索工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Paperfetcher: A tool to automate handsearching and citation searching for systematic reviews

Systematic reviews are vital instruments for researchers to understand broad trends in a field and synthesize evidence on the effectiveness of interventions in addressing specific issues. The quality of a systematic review depends critically on having comprehensively surveyed all relevant literature on the review topic. In addition to database searching, handsearching is an important supplementary technique that helps increase the likelihood of identifying all relevant studies in a literature search. Traditional handsearching requires reviewers to manually browse through a curated list of field-specific journals and conference proceedings to find articles relevant to the review topic. This manual process is not only time-consuming, laborious, costly, and error-prone due to human fatigue, but it also lacks replicability due to its cumbersome manual nature. To address these issues, this paper presents a free and open-source Python package and an accompanying web-app, Paperfetcher, to automate the retrieval of article metadata for handsearching. With Paperfetcher's assistance, researchers can retrieve article metadata from designated journals within a specified time frame in just a few clicks. In addition to handsearching, it also incorporates a beta version of citation searching in both forward and backward directions. Paperfetcher has an easy-to-use interface, which allows researchers to download the metadata of retrieved studies as a list of DOIs or as an RIS file to facilitate seamless import into systematic review screening software. To the best of our knowledge, Paperfetcher is the first tool to automate handsearching with high usability and a multi-disciplinary focus.

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来源期刊
Research Synthesis Methods
Research Synthesis Methods MATHEMATICAL & COMPUTATIONAL BIOLOGYMULTID-MULTIDISCIPLINARY SCIENCES
CiteScore
16.90
自引率
3.10%
发文量
75
期刊介绍: Research Synthesis Methods is a reputable, peer-reviewed journal that focuses on the development and dissemination of methods for conducting systematic research synthesis. Our aim is to advance the knowledge and application of research synthesis methods across various disciplines. Our journal provides a platform for the exchange of ideas and knowledge related to designing, conducting, analyzing, interpreting, reporting, and applying research synthesis. While research synthesis is commonly practiced in the health and social sciences, our journal also welcomes contributions from other fields to enrich the methodologies employed in research synthesis across scientific disciplines. By bridging different disciplines, we aim to foster collaboration and cross-fertilization of ideas, ultimately enhancing the quality and effectiveness of research synthesis methods. Whether you are a researcher, practitioner, or stakeholder involved in research synthesis, our journal strives to offer valuable insights and practical guidance for your work.
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