小立藓双功能对烯合成酶的计算研究Bruch & Schimp。植物中萜类生物合成的起源

A. Mukherjee
{"title":"小立藓双功能对烯合成酶的计算研究Bruch & Schimp。植物中萜类生物合成的起源","authors":"A. Mukherjee","doi":"10.1080/12538078.2015.1017774","DOIUrl":null,"url":null,"abstract":"Abstract Plants produce many terpenoids including gibberellins and many commercially important secondary metabolites. The final steps of terpenoid production involve terpene synthase (TPS) enzymes. The origin of plant TPS is not known; searches for TPS showed their presence in all plant groups except algae. Although many plants have several genes in their genome that encode TPS enzymes, the bryophyte Physcomitrella patens (Hedw.) Bruch & Schimp. possesses only one bifunctional ent-kaurene synthase (PpCPS/KS), which produces both 16α-hydroxykaurane and ent-kaurene (the precursor of gibberellins). This protein shares characteristics of two unifunctional TPS of higher plants – ent-copalyl diphosphate synthase (CPS) and ent-kaurene synthase (KS). Bifunctional TPS are also found in fungi. In this study, the bifunctional PpCPS/KS has been characterized by some bioinformatics tools. Comparative analysis of PpCPS/KS with some fungal and plant TPS as well as terpenoid-producing bacterial enzymes has been performed. The results indicate that bifunctional TPS came from fungi to bryophytes, probably by horizontal gene transfer and unifunctional TPS gradually evolved from bifunctional TPS in higher plants.","PeriodicalId":7129,"journal":{"name":"Acta Botanica Gallica","volume":"162 1","pages":"139 - 152"},"PeriodicalIF":0.0000,"publicationDate":"2015-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/12538078.2015.1017774","citationCount":"2","resultStr":"{\"title\":\"Computational study of a bifunctional ent-kaurene synthase from Physcomitrella patens (Hedw.) Bruch & Schimp.: an insight into the origin of terpenoid biosynthesis in plants\",\"authors\":\"A. Mukherjee\",\"doi\":\"10.1080/12538078.2015.1017774\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract Plants produce many terpenoids including gibberellins and many commercially important secondary metabolites. The final steps of terpenoid production involve terpene synthase (TPS) enzymes. The origin of plant TPS is not known; searches for TPS showed their presence in all plant groups except algae. Although many plants have several genes in their genome that encode TPS enzymes, the bryophyte Physcomitrella patens (Hedw.) Bruch & Schimp. possesses only one bifunctional ent-kaurene synthase (PpCPS/KS), which produces both 16α-hydroxykaurane and ent-kaurene (the precursor of gibberellins). This protein shares characteristics of two unifunctional TPS of higher plants – ent-copalyl diphosphate synthase (CPS) and ent-kaurene synthase (KS). Bifunctional TPS are also found in fungi. In this study, the bifunctional PpCPS/KS has been characterized by some bioinformatics tools. Comparative analysis of PpCPS/KS with some fungal and plant TPS as well as terpenoid-producing bacterial enzymes has been performed. The results indicate that bifunctional TPS came from fungi to bryophytes, probably by horizontal gene transfer and unifunctional TPS gradually evolved from bifunctional TPS in higher plants.\",\"PeriodicalId\":7129,\"journal\":{\"name\":\"Acta Botanica Gallica\",\"volume\":\"162 1\",\"pages\":\"139 - 152\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2015-04-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1080/12538078.2015.1017774\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta Botanica Gallica\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1080/12538078.2015.1017774\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta Botanica Gallica","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1080/12538078.2015.1017774","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2

摘要

植物产生许多萜类化合物,包括赤霉素和许多商业上重要的次生代谢物。萜类化合物生产的最后步骤涉及萜类合成酶(TPS)酶。植物TPS的起源尚不清楚;对TPS的搜索显示,除了藻类,它们在所有植物类群中都存在。尽管许多植物的基因组中有几个编码TPS酶的基因,但苔藓植物小壶藻(Physcomitrella patens)。Bruch & Schimp。仅具有一种双功能的对karen合成酶(PpCPS/KS),该合成酶可同时产生16α-羟基kaurane和对karen(赤霉素的前体)。该蛋白具有高等植物两种功能性TPS的特征- - -共聚二磷酸合成酶(CPS)和- - -丁香烯合成酶(KS)。双功能TPS也存在于真菌中。在本研究中,双功能PpCPS/KS已被一些生物信息学工具表征。PpCPS/KS与一些真菌和植物TPS以及产生萜类化合物的细菌酶进行了比较分析。结果表明,双功能TPS可能是通过水平基因转移从真菌到苔藓植物,并在高等植物中逐渐由双功能TPS进化而来。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Computational study of a bifunctional ent-kaurene synthase from Physcomitrella patens (Hedw.) Bruch & Schimp.: an insight into the origin of terpenoid biosynthesis in plants
Abstract Plants produce many terpenoids including gibberellins and many commercially important secondary metabolites. The final steps of terpenoid production involve terpene synthase (TPS) enzymes. The origin of plant TPS is not known; searches for TPS showed their presence in all plant groups except algae. Although many plants have several genes in their genome that encode TPS enzymes, the bryophyte Physcomitrella patens (Hedw.) Bruch & Schimp. possesses only one bifunctional ent-kaurene synthase (PpCPS/KS), which produces both 16α-hydroxykaurane and ent-kaurene (the precursor of gibberellins). This protein shares characteristics of two unifunctional TPS of higher plants – ent-copalyl diphosphate synthase (CPS) and ent-kaurene synthase (KS). Bifunctional TPS are also found in fungi. In this study, the bifunctional PpCPS/KS has been characterized by some bioinformatics tools. Comparative analysis of PpCPS/KS with some fungal and plant TPS as well as terpenoid-producing bacterial enzymes has been performed. The results indicate that bifunctional TPS came from fungi to bryophytes, probably by horizontal gene transfer and unifunctional TPS gradually evolved from bifunctional TPS in higher plants.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信