{"title":"利用Petri网模拟和靶向恶性疟原虫在顶质体中的重要代谢途径","authors":"Sakshi Gupta, Gajendra Pratap Singh, Sunita Kumawat","doi":"10.1007/s11766-022-4413-x","DOIUrl":null,"url":null,"abstract":"<div><p>Petri net (PN) is one of the promising computational and mathematical formalisms used to represent and study the behavior of complex metabolic networks. The various available analysis techniques of PN could be used to validate and analyze the network in different scenarios. <i>Plasmodium falciparum</i> is one of the threatening parasites which causes malaria, a deadly disease affecting a large number of today’s world population. The development of antimalarial drug resistance is an emerging global threat, highlighting the need to discover novel antimalarial targets. The fatty acid biosynthesis of malarial parasite is one of the essential metabolic pathways required for its growth and is present in apicoplast, a non-photosynthetic plastid. The malarial parasite obtains fatty acids by using type two fatty acid synthase (FAS II) enzyme, which is different from type one enzyme used by human host, making it an ideal drug target. This article proposes and studies the PN model of the parasite’s FAS II pathway to analyze the mechanism of potential drug targets in this pathway. The proposed PN model can serve as a base for further findings in the field of antimalarial drug targets to decrease the malaria mortality rate.</p></div>","PeriodicalId":55568,"journal":{"name":"Applied Mathematics-A Journal of Chinese Universities Series B","volume":"37 1","pages":"91 - 110"},"PeriodicalIF":1.0000,"publicationDate":"2022-03-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Modeling and targeting an essential metabolic pathway of Plasmodium falciparum in apicoplast using Petri nets\",\"authors\":\"Sakshi Gupta, Gajendra Pratap Singh, Sunita Kumawat\",\"doi\":\"10.1007/s11766-022-4413-x\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Petri net (PN) is one of the promising computational and mathematical formalisms used to represent and study the behavior of complex metabolic networks. The various available analysis techniques of PN could be used to validate and analyze the network in different scenarios. <i>Plasmodium falciparum</i> is one of the threatening parasites which causes malaria, a deadly disease affecting a large number of today’s world population. The development of antimalarial drug resistance is an emerging global threat, highlighting the need to discover novel antimalarial targets. The fatty acid biosynthesis of malarial parasite is one of the essential metabolic pathways required for its growth and is present in apicoplast, a non-photosynthetic plastid. The malarial parasite obtains fatty acids by using type two fatty acid synthase (FAS II) enzyme, which is different from type one enzyme used by human host, making it an ideal drug target. This article proposes and studies the PN model of the parasite’s FAS II pathway to analyze the mechanism of potential drug targets in this pathway. The proposed PN model can serve as a base for further findings in the field of antimalarial drug targets to decrease the malaria mortality rate.</p></div>\",\"PeriodicalId\":55568,\"journal\":{\"name\":\"Applied Mathematics-A Journal of Chinese Universities Series B\",\"volume\":\"37 1\",\"pages\":\"91 - 110\"},\"PeriodicalIF\":1.0000,\"publicationDate\":\"2022-03-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Applied Mathematics-A Journal of Chinese Universities Series B\",\"FirstCategoryId\":\"1089\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s11766-022-4413-x\",\"RegionNum\":4,\"RegionCategory\":\"数学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Applied Mathematics-A Journal of Chinese Universities Series B","FirstCategoryId":"1089","ListUrlMain":"https://link.springer.com/article/10.1007/s11766-022-4413-x","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Modeling and targeting an essential metabolic pathway of Plasmodium falciparum in apicoplast using Petri nets
Petri net (PN) is one of the promising computational and mathematical formalisms used to represent and study the behavior of complex metabolic networks. The various available analysis techniques of PN could be used to validate and analyze the network in different scenarios. Plasmodium falciparum is one of the threatening parasites which causes malaria, a deadly disease affecting a large number of today’s world population. The development of antimalarial drug resistance is an emerging global threat, highlighting the need to discover novel antimalarial targets. The fatty acid biosynthesis of malarial parasite is one of the essential metabolic pathways required for its growth and is present in apicoplast, a non-photosynthetic plastid. The malarial parasite obtains fatty acids by using type two fatty acid synthase (FAS II) enzyme, which is different from type one enzyme used by human host, making it an ideal drug target. This article proposes and studies the PN model of the parasite’s FAS II pathway to analyze the mechanism of potential drug targets in this pathway. The proposed PN model can serve as a base for further findings in the field of antimalarial drug targets to decrease the malaria mortality rate.
期刊介绍:
Applied Mathematics promotes the integration of mathematics with other scientific disciplines, expanding its fields of study and promoting the development of relevant interdisciplinary subjects.
The journal mainly publishes original research papers that apply mathematical concepts, theories and methods to other subjects such as physics, chemistry, biology, information science, energy, environmental science, economics, and finance. In addition, it also reports the latest developments and trends in which mathematics interacts with other disciplines. Readers include professors and students, professionals in applied mathematics, and engineers at research institutes and in industry.
Applied Mathematics - A Journal of Chinese Universities has been an English-language quarterly since 1993. The English edition, abbreviated as Series B, has different contents than this Chinese edition, Series A.