山楂对胃肠道肿瘤的影响:网络药理学与分子对接研究

Jing Yang , Jialin Gu , Ying Shen , Ling Cao , Hong Zhou , Wei Zhu
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引用次数: 2

摘要

山楂是治疗高脂血症最常用的中药。胃肠道癌症与血脂水平密切相关。本研究基于网络药理学和分子对接阐明了山渣对胃肠道肿瘤的潜在抗癌作用。方法从中药系统药理学数据库和分析平台(TCMSP)、中药综合药理学研究平台2.0版(TCMIP v2.0)和中药成分靶标平台(HIT 2.0)数据库中获得山楂的生物活性成分和药物靶标。经验证的胃肠道癌症疾病靶点来自治疗靶点数据库(TTD)和HIT 2.0数据库。交叉基因的蛋白质-蛋白质相互作用分析使用检索相互作用基因的搜索工具(STRING)数据库进行。通过基因本体论和京都基因与基因组百科全书(KEGG)富集分析进一步分析了这些基因的功能。使用分子操作环境(MOE)软件进行分子对接验证。结果从山渣中鉴定出四种主要的生物活性成分。共鉴定出271个潜在药物靶点,获得393个胃肠道肿瘤靶点。通过交叉靶点的蛋白质相互作用分析,发现山渣的主要成分与肿瘤蛋白p53(TP53)、AKT丝氨酸/苏氨酸激酶1(AKT1)、JUN原癌基因(JUN)、白细胞介素6(IL6)、表皮生长因子受体(EGFR)和血管内皮生长因子A(VEGFA)等蛋白质的相互作用更为密切。KEGG通路富集分析显示共有127条通路,主要涉及多种类型癌症的通路、磷脂酰肌醇3-激酶-Akt(PI3K-Akt)信号通路和EGFR酪氨酸激酶抑制剂耐药性。结合癌症基因组图谱(TCGA)差异分析,筛选关键靶点,包括TP53、细胞周期蛋白D1(CCND1)、EGFR和VEGFA。分子对接结果表明,槲皮素和山奈酚对TP53、CCND1、EGFR和VEGFA具有良好的结合潜力。结论山渣对胃肠道恶性肿瘤的作用机制是多靶点、多组分、多途径的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Effect of Shan Zha (Hawthorn or Crataegus) on gastrointestinal cancer: A network pharmacology and molecular docking study

Background

Shan Zha (Hawthorn or Crataegus) is a traditional Chinese medicine (TCM) most commonly used for the treatment of hyperlipidemia. Gastrointestinal cancer is closely correlated with blood lipid levels. This study illustrates the potential anticancer effects of Shan Zha on gastrointestinal tumors based on network pharmacology and molecular docking.

Methods

Hawthorn's bioactive ingredients and drug targets were obtained from the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP), Integrative Pharmacology-based Research Platform of Traditional Chinese Medicine version 2.0 (TCMIP v2.0), and Herbal Ingredients' Targets Platform (HIT 2.0) databases. Validated disease targets of gastrointestinal cancer were obtained from the Therapeutic Targets Database (TTD) and HIT 2.0 databases. Protein–protein interaction analysis of intersecting genes was performed using the Search Tool for the Retrieval of Interacting Genes (STRING) database. The functions of these genes were further analyzed by performing gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses. Molecular docking verification was performed using Molecular Operating Environment (MOE) software.

Results

Four main bioactive components were identified in Shan Zha. A total of 271 potential drug targets were identified, and 393 gastrointestinal-tumor targets were obtained. Through protein interaction analysis of intersecting targets, the main components of Shan Zha were found to interact more closely with proteins such as tumor protein p53 (TP53), AKT serine/threonine kinase 1 (AKT1), JUN proto-oncogene (JUN), interleukin 6 (IL6), epidermal growth factor receptor (EGFR), and vascular endothelial growth factor A (VEGFA). KEGG pathway enrichment analysis showed a total of 127 pathways, mainly involving pathways in multiple types of cancer, the Phosphatidylinositol 3-kinase-Akt (PI3K-Akt) signaling pathway, and EGFR tyrosine kinase inhibitor resistance. Combined with The Cancer Genome Atlas (TCGA) differential analysis, key targets, including TP53, cyclin D1 (CCND1), EGFR, and VEGFA, were screened. Molecular docking results showed that quercetin and kaempferol had the good binding potential for TP53, CCND1, EGFR, and VEGFA.

Conclusion

These findings suggest that Shan Zha exerts its effects on gastrointestinal cancers through a multitarget, multi-component, and a multi-pathway mechanism.

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来源期刊
Cancer pathogenesis and therapy
Cancer pathogenesis and therapy Surgery, Radiology and Imaging, Cancer Research, Oncology
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