Shijie Fang , Jia Fu , Chen Du , Tong Lin , Yan Yan
{"title":"基于深度学习的目标检测在喉镜图像中识别喉肿瘤:一个极小数据集的案例研究","authors":"Shijie Fang , Jia Fu , Chen Du , Tong Lin , Yan Yan","doi":"10.1016/j.irbm.2023.100799","DOIUrl":null,"url":null,"abstract":"<div><h3>Objectives</h3><p><span><span>Laryngoscopy is a medical procedure for obtaining a view of the human </span>larynx. It is challenging for clinicians to distinguish </span>laryngeal neoplasms<span> by human visual observation. Recent deep learning methods can assist clinicians in improving the accuracy of distinguishing. However, existed methods are often trained on large-scale private datasets, while other researchers and hospitals can neither access these private datasets nor afford to build such large-scale datasets. In this paper, we focus on identifying laryngeal neoplasms under the “small data” regime, which is more important for many small hospitals to investigate deep learning models for diagnosis.</span></p></div><div><h3>Material and methods</h3><p>We build an extremely small dataset consisting of 279 laryngoscopic images of different categories. We found that traditional deep learning models for image classification<span> cannot achieve satisfactory performance for small data, due to the great variability of recording laryngoscopic images and the small area of the neoplasms. To address these difficulties, we propose to employ object detection methods for this small data problem. Concretely, a Faster R-CNN is implemented here, which combines the DropBlock regularization technique to alleviate overfitting additionally.</span></p></div><div><h3>Results</h3><p>Compared to previous methods, our model is more robust to overfitting and can predict the location and category of detected neoplasms simultaneously. Our method achieves 73.00% overall accuracy, which is higher than the average of clinicians (65.05%) and the recent state-of-the-art classification method (65.00%).</p></div><div><h3>Conclusion</h3><p>The proposed method shows great ability to detect both the category and location of neoplasms and can be served as a screening tool to help the final decisions of clinicians.</p></div>","PeriodicalId":14605,"journal":{"name":"Irbm","volume":"44 6","pages":"Article 100799"},"PeriodicalIF":5.6000,"publicationDate":"2023-09-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identifying Laryngeal Neoplasms in Laryngoscope Images via Deep Learning Based Object Detection: A Case Study on an Extremely Small Data Set\",\"authors\":\"Shijie Fang , Jia Fu , Chen Du , Tong Lin , Yan Yan\",\"doi\":\"10.1016/j.irbm.2023.100799\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Objectives</h3><p><span><span>Laryngoscopy is a medical procedure for obtaining a view of the human </span>larynx. It is challenging for clinicians to distinguish </span>laryngeal neoplasms<span> by human visual observation. Recent deep learning methods can assist clinicians in improving the accuracy of distinguishing. However, existed methods are often trained on large-scale private datasets, while other researchers and hospitals can neither access these private datasets nor afford to build such large-scale datasets. In this paper, we focus on identifying laryngeal neoplasms under the “small data” regime, which is more important for many small hospitals to investigate deep learning models for diagnosis.</span></p></div><div><h3>Material and methods</h3><p>We build an extremely small dataset consisting of 279 laryngoscopic images of different categories. We found that traditional deep learning models for image classification<span> cannot achieve satisfactory performance for small data, due to the great variability of recording laryngoscopic images and the small area of the neoplasms. To address these difficulties, we propose to employ object detection methods for this small data problem. Concretely, a Faster R-CNN is implemented here, which combines the DropBlock regularization technique to alleviate overfitting additionally.</span></p></div><div><h3>Results</h3><p>Compared to previous methods, our model is more robust to overfitting and can predict the location and category of detected neoplasms simultaneously. Our method achieves 73.00% overall accuracy, which is higher than the average of clinicians (65.05%) and the recent state-of-the-art classification method (65.00%).</p></div><div><h3>Conclusion</h3><p>The proposed method shows great ability to detect both the category and location of neoplasms and can be served as a screening tool to help the final decisions of clinicians.</p></div>\",\"PeriodicalId\":14605,\"journal\":{\"name\":\"Irbm\",\"volume\":\"44 6\",\"pages\":\"Article 100799\"},\"PeriodicalIF\":5.6000,\"publicationDate\":\"2023-09-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Irbm\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1959031823000489\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Irbm","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1959031823000489","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
Identifying Laryngeal Neoplasms in Laryngoscope Images via Deep Learning Based Object Detection: A Case Study on an Extremely Small Data Set
Objectives
Laryngoscopy is a medical procedure for obtaining a view of the human larynx. It is challenging for clinicians to distinguish laryngeal neoplasms by human visual observation. Recent deep learning methods can assist clinicians in improving the accuracy of distinguishing. However, existed methods are often trained on large-scale private datasets, while other researchers and hospitals can neither access these private datasets nor afford to build such large-scale datasets. In this paper, we focus on identifying laryngeal neoplasms under the “small data” regime, which is more important for many small hospitals to investigate deep learning models for diagnosis.
Material and methods
We build an extremely small dataset consisting of 279 laryngoscopic images of different categories. We found that traditional deep learning models for image classification cannot achieve satisfactory performance for small data, due to the great variability of recording laryngoscopic images and the small area of the neoplasms. To address these difficulties, we propose to employ object detection methods for this small data problem. Concretely, a Faster R-CNN is implemented here, which combines the DropBlock regularization technique to alleviate overfitting additionally.
Results
Compared to previous methods, our model is more robust to overfitting and can predict the location and category of detected neoplasms simultaneously. Our method achieves 73.00% overall accuracy, which is higher than the average of clinicians (65.05%) and the recent state-of-the-art classification method (65.00%).
Conclusion
The proposed method shows great ability to detect both the category and location of neoplasms and can be served as a screening tool to help the final decisions of clinicians.
期刊介绍:
IRBM is the journal of the AGBM (Alliance for engineering in Biology an Medicine / Alliance pour le génie biologique et médical) and the SFGBM (BioMedical Engineering French Society / Société française de génie biologique médical) and the AFIB (French Association of Biomedical Engineers / Association française des ingénieurs biomédicaux).
As a vehicle of information and knowledge in the field of biomedical technologies, IRBM is devoted to fundamental as well as clinical research. Biomedical engineering and use of new technologies are the cornerstones of IRBM, providing authors and users with the latest information. Its six issues per year propose reviews (state-of-the-art and current knowledge), original articles directed at fundamental research and articles focusing on biomedical engineering. All articles are submitted to peer reviewers acting as guarantors for IRBM''s scientific and medical content. The field covered by IRBM includes all the discipline of Biomedical engineering. Thereby, the type of papers published include those that cover the technological and methodological development in:
-Physiological and Biological Signal processing (EEG, MEG, ECG…)-
Medical Image processing-
Biomechanics-
Biomaterials-
Medical Physics-
Biophysics-
Physiological and Biological Sensors-
Information technologies in healthcare-
Disability research-
Computational physiology-
…