广义能量碎裂法准确有效地预测凝聚相系统的振动圆二色性光谱

IF 2.9 Q3 CHEMISTRY, PHYSICAL
Dongbo Zhao, K. Liao, Benkun Hong, Wei Li, Shuhua Li
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引用次数: 1

摘要

振动圆二色性(VCD)光谱可以确定凝聚相系统的分子手性,但其量子化学计算成本高昂。基于碎片的方法尚未应用于周期系统的VCD光谱。在这项工作中,我们扩展了广义基于能量的碎裂(GEBF)方法,以准确有效地计算周期边界条件下手性分子晶体和溶液中大分子的VCD光谱。在这种方法中,Hessian矩阵,即目标系统的原子极/轴张量,被评估为来自一系列小型静电嵌入子系统的相应量的线性组合。对两个大分子的GEBF和常规VCD光谱的比较表明,该方法可以令人满意地再现传统的计算结果。然后,我们应用PBC-GEBF方法计算了溶液中一个手性分子晶体和两个大分子的VCD光谱。我们的结果表明,实验VCD光谱可以从带形和振动峰两个方面粗略地再现。GEBF-VCD和PBC-GEBF-VCD方法有望成为研究溶液中分子晶体和大分子手性的实用工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Accurate and efficient prediction of vibrational circular dichroism spectra of condensed-phase systems with the generalized energy-based fragmentation method
The vibrational circular dichroism (VCD) spectra could determine the molecular chirality of condensed-phase systems, but their quantum chemistry calculations are costly. The fragment-based methods have not been applied to the VCD spectra of periodic systems yet. In this work, we have extended the generalized energy-based fragmentation (GEBF) approach to accurately and efficiently compute the VCD spectra of chiral molecular crystals under periodic boundary conditions (PBCs) and macromolecules in solutions. In this approach, the Hessian matrices, atomic polar/axial tensors of a target system, are evaluated as a linear combination of the corresponding quantities from a series of small electrostatically embedded subsystems. Comparisons of GEBF and conventional VCD spectra of two large molecules show that this approach can satisfactorily reproduce the conventional computational results. Then, we applied the PBC-GEBF method to calculate the VCD spectra of a chiral molecular crystal and two macromolecules in solutions. Our results show that the experimental VCD spectrum can be roughly reproduced in terms of both band shape and vibrational peaks. The GEBF-VCD and PBC-GEBF-VCD approaches are expected to be practical tools to investigate the chirality of molecular crystals and macromolecules in solutions.
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来源期刊
CiteScore
3.70
自引率
11.50%
发文量
46
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