O. Babak, N. Anisimova, T. Nikitinskaya, N. Nekrashevich, K. Yatsevich, L. V. Drozd, D. Fateev, F. A. Berensen, A. Artemyeva, A. Kilchevsky
{"title":"茄科R2R3-Myb和芸苔属Myb114转录因子基因多态性与花青素生物合成调控的研究","authors":"O. Babak, N. Anisimova, T. Nikitinskaya, N. Nekrashevich, K. Yatsevich, L. V. Drozd, D. Fateev, F. A. Berensen, A. Artemyeva, A. Kilchevsky","doi":"10.29235/1561-8323-2022-66-4-414-424","DOIUrl":null,"url":null,"abstract":"Based on comparison of R2R3 Myb genes in Solanaceae (S. lycopersicum: Ant1, Ant2, S. melongena: Myb1, C. annuum: Myb113-like1 and Myb113-like2) and Brassicaceae crops, a search for orthologous sequences was The sequences encoding Myb114 TF in Brassica oleracea and Brassica rapa was found to be the closest in a nucleotide structure to the previously investigated genes in Solanaceae. Тhе polymorphism in the promoter region of the Capsicum annuum Myb113-like1 gene that regulates anthocyanin biosynthesis: an additional 148 bp repeat and 2(1) bp insertion in the forms with impaired anthocyanin synthesis in fruits was studied. A relationship between the presence of an insert in the promoter (Myb113-like1pr+148) and polymorphisms in the exon regions of Myb113-like1delTand Myb113-like2C/Аgenes associated with impaired anthocyanin synthesis was established. A number of polymorphisms of the Myb114 gene in vegetable crops of the cabbage family (Brassica oleracea, Brassica rapa), which closely correlate with high/low accumulation of anthocyanins in leaves, were identified. In B. oleracea, SNPs that lead to the replacement of two amino acids located in the region of DNAbinding domains were found, which leads to a change in the efficiency of binding of this transcription factor and the promoters of structural biosynthesis genes. A protein sequence encoded by the Myb114 gene in accessions of the leafy turnip (B. rapa) with a high accumulation of anthocyanins in the leaves differed from the accessions without anthocyanin accumulation in the leaves by five amino acids, while the regions of DNA-binding domains were the same in the forms with various anthocyanin accumulation.","PeriodicalId":41825,"journal":{"name":"DOKLADY NATSIONALNOI AKADEMII NAUK BELARUSI","volume":" ","pages":""},"PeriodicalIF":0.1000,"publicationDate":"2022-09-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Investigating of the polymorphism of Solanaceae R2R3 Myb and Brassica Myb114 genes of transcription factors in connection with the anthocyanin biosynthesis regulation\",\"authors\":\"O. Babak, N. Anisimova, T. Nikitinskaya, N. Nekrashevich, K. Yatsevich, L. V. Drozd, D. Fateev, F. A. Berensen, A. Artemyeva, A. 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引用次数: 0
摘要
通过比较茄科(S. lycopersicum: Ant1, Ant2, S. melongena: Myb1, C. annuum: Myb113-like1和Myb113-like2)和芸苔科作物的R2R3 Myb基因,寻找同源序列,发现甘蓝和rapa中编码Myb114 TF的序列与先前研究的茄科基因在核苷酸结构上最接近。研究了花青素合成调控基因Myb113-like1启动子区域Тhе多态性:在花青素合成受损的果实中增加148 bp重复和2(1)bp插入。启动子插入物(Myb113-like1pr+148)的存在与Myb113-like1delTand Myb113-like2C/Аgenes外显子区域多态性与花青素合成受损之间建立了关系。在甘蓝科蔬菜作物(Brassica oleracea, Brassica rapa)中,Myb114基因的多态性与叶片花青素的高低积累密切相关。在甘蓝中,发现了导致位于dna结合域区域的两个氨基酸被替换的snp,从而导致该转录因子与结构生物合成基因启动子的结合效率发生变化。花青素积累量高的叶芜菁材料Myb114基因编码的蛋白质序列与花青素积累量不高的叶芜菁材料有5个氨基酸的差异,而花青素积累量不同的叶芜菁材料dna结合域的区域相同。
Investigating of the polymorphism of Solanaceae R2R3 Myb and Brassica Myb114 genes of transcription factors in connection with the anthocyanin biosynthesis regulation
Based on comparison of R2R3 Myb genes in Solanaceae (S. lycopersicum: Ant1, Ant2, S. melongena: Myb1, C. annuum: Myb113-like1 and Myb113-like2) and Brassicaceae crops, a search for orthologous sequences was The sequences encoding Myb114 TF in Brassica oleracea and Brassica rapa was found to be the closest in a nucleotide structure to the previously investigated genes in Solanaceae. Тhе polymorphism in the promoter region of the Capsicum annuum Myb113-like1 gene that regulates anthocyanin biosynthesis: an additional 148 bp repeat and 2(1) bp insertion in the forms with impaired anthocyanin synthesis in fruits was studied. A relationship between the presence of an insert in the promoter (Myb113-like1pr+148) and polymorphisms in the exon regions of Myb113-like1delTand Myb113-like2C/Аgenes associated with impaired anthocyanin synthesis was established. A number of polymorphisms of the Myb114 gene in vegetable crops of the cabbage family (Brassica oleracea, Brassica rapa), which closely correlate with high/low accumulation of anthocyanins in leaves, were identified. In B. oleracea, SNPs that lead to the replacement of two amino acids located in the region of DNAbinding domains were found, which leads to a change in the efficiency of binding of this transcription factor and the promoters of structural biosynthesis genes. A protein sequence encoded by the Myb114 gene in accessions of the leafy turnip (B. rapa) with a high accumulation of anthocyanins in the leaves differed from the accessions without anthocyanin accumulation in the leaves by five amino acids, while the regions of DNA-binding domains were the same in the forms with various anthocyanin accumulation.