Christian Thiemann, Britta Klitzke, Philipp Martinetz, Philipp Grüning, Thomas Käster, E. Barth, Jan Kramer, T. Martinetz
{"title":"利用深度神经网络自动评估免疫固定","authors":"Christian Thiemann, Britta Klitzke, Philipp Martinetz, Philipp Grüning, Thomas Käster, E. Barth, Jan Kramer, T. Martinetz","doi":"10.1515/labmed-2022-0078","DOIUrl":null,"url":null,"abstract":"Abstract Objectives The reliable evaluation of immunofixation electrophoresis is part of the laboratory diagnosis of multiple myeloma. Until now, this has been done routinely by the subjective assessment of a qualified laboratory staff member. The possibility of subjective errors and relatively high costs with long staff retention are the challenges of this approach commonly used today. Methods Deep Convolutional Neural Networks are applied to the assessment of immunofixation images. In addition to standard monoclonal gammopathies (IgA-Kappa, IgA-Lambda, IgG-Kappa, IgG-Lambda, IgM-Kappa, and IgM-Lambda), also bi- or oligoclonal gammopathies, free chain gammopathies, non-pathological cases, and cases with no clear finding are detected. The assignment to one of these 10 classes comes with a confidence value. Results On a test data set with over 4,000 images, approximately 25% of the cases are sorted out as inconclusive or due to low confidence for subsequent manual evaluation. On the remaining 75%, about 3,000 cases, not even one is classified as falsely positive, and only one as falsely negative. The remaining few deviations of the automated assessment from the classifications assigned manually by experts are borderline cases or can be explained otherwise. As a software running on a standard desktop computer, the Deep Convolutional Neural Network needs less than a second for the assessment of an immunofixation image. Conclusions Assisting the laboratory expert in the assessment of immunofixation images can be a useful addition to laboratory diagnostics. However, the decision-making authority should always remain with the physician responsible for the findings.","PeriodicalId":55986,"journal":{"name":"Journal of Laboratory Medicine","volume":"46 1","pages":"331 - 336"},"PeriodicalIF":1.1000,"publicationDate":"2022-08-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Automated assessment of immunofixations with deep neural networks\",\"authors\":\"Christian Thiemann, Britta Klitzke, Philipp Martinetz, Philipp Grüning, Thomas Käster, E. Barth, Jan Kramer, T. Martinetz\",\"doi\":\"10.1515/labmed-2022-0078\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Abstract Objectives The reliable evaluation of immunofixation electrophoresis is part of the laboratory diagnosis of multiple myeloma. Until now, this has been done routinely by the subjective assessment of a qualified laboratory staff member. The possibility of subjective errors and relatively high costs with long staff retention are the challenges of this approach commonly used today. Methods Deep Convolutional Neural Networks are applied to the assessment of immunofixation images. In addition to standard monoclonal gammopathies (IgA-Kappa, IgA-Lambda, IgG-Kappa, IgG-Lambda, IgM-Kappa, and IgM-Lambda), also bi- or oligoclonal gammopathies, free chain gammopathies, non-pathological cases, and cases with no clear finding are detected. The assignment to one of these 10 classes comes with a confidence value. Results On a test data set with over 4,000 images, approximately 25% of the cases are sorted out as inconclusive or due to low confidence for subsequent manual evaluation. On the remaining 75%, about 3,000 cases, not even one is classified as falsely positive, and only one as falsely negative. The remaining few deviations of the automated assessment from the classifications assigned manually by experts are borderline cases or can be explained otherwise. As a software running on a standard desktop computer, the Deep Convolutional Neural Network needs less than a second for the assessment of an immunofixation image. Conclusions Assisting the laboratory expert in the assessment of immunofixation images can be a useful addition to laboratory diagnostics. However, the decision-making authority should always remain with the physician responsible for the findings.\",\"PeriodicalId\":55986,\"journal\":{\"name\":\"Journal of Laboratory Medicine\",\"volume\":\"46 1\",\"pages\":\"331 - 336\"},\"PeriodicalIF\":1.1000,\"publicationDate\":\"2022-08-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Laboratory Medicine\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1515/labmed-2022-0078\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MEDICAL LABORATORY TECHNOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Laboratory Medicine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1515/labmed-2022-0078","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MEDICAL LABORATORY TECHNOLOGY","Score":null,"Total":0}
Automated assessment of immunofixations with deep neural networks
Abstract Objectives The reliable evaluation of immunofixation electrophoresis is part of the laboratory diagnosis of multiple myeloma. Until now, this has been done routinely by the subjective assessment of a qualified laboratory staff member. The possibility of subjective errors and relatively high costs with long staff retention are the challenges of this approach commonly used today. Methods Deep Convolutional Neural Networks are applied to the assessment of immunofixation images. In addition to standard monoclonal gammopathies (IgA-Kappa, IgA-Lambda, IgG-Kappa, IgG-Lambda, IgM-Kappa, and IgM-Lambda), also bi- or oligoclonal gammopathies, free chain gammopathies, non-pathological cases, and cases with no clear finding are detected. The assignment to one of these 10 classes comes with a confidence value. Results On a test data set with over 4,000 images, approximately 25% of the cases are sorted out as inconclusive or due to low confidence for subsequent manual evaluation. On the remaining 75%, about 3,000 cases, not even one is classified as falsely positive, and only one as falsely negative. The remaining few deviations of the automated assessment from the classifications assigned manually by experts are borderline cases or can be explained otherwise. As a software running on a standard desktop computer, the Deep Convolutional Neural Network needs less than a second for the assessment of an immunofixation image. Conclusions Assisting the laboratory expert in the assessment of immunofixation images can be a useful addition to laboratory diagnostics. However, the decision-making authority should always remain with the physician responsible for the findings.
期刊介绍:
The Journal of Laboratory Medicine (JLM) is a bi-monthly published journal that reports on the latest developments in laboratory medicine. Particular focus is placed on the diagnostic aspects of the clinical laboratory, although technical, regulatory, and educational topics are equally covered. The Journal specializes in the publication of high-standard, competent and timely review articles on clinical, methodological and pathogenic aspects of modern laboratory diagnostics. These reviews are critically reviewed by expert reviewers and JLM’s Associate Editors who are specialists in the various subdisciplines of laboratory medicine. In addition, JLM publishes original research articles, case reports, point/counterpoint articles and letters to the editor, all of which are peer reviewed by at least two experts in the field.