利用微卫星(ISSR)标记评价观赏蕨类植物的多态性和遗传多样性

Q4 Biochemistry, Genetics and Molecular Biology
D. A. Animasaun, S. Oyedeji, R. Ingalhalli, R. Krishnamurthy
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引用次数: 1

摘要

本研究利用ISSR (intersimple sequence repeat)标记对尼日利亚公园和园林中6种观赏蕨类植物的遗传多样性进行了评价。从样品中提取基因组DNA,利用7个ISSR标记进行聚合酶链反应(PCR)。电泳图显示,各蕨类植物的扩增子大小在100bp-1Kb之间。共得到87条条带,多态性占71.26%,单态占28.73%。引物平均带数为12.4条,多态性范围为31.23 ~ 100%,其中ISSR2多态性最高。Nei的平均遗传多样性为29%,Shannon的平均遗传多样性指数为43.5%。毛茛和棘毛翼蕨的遗传距离最大,为0.6592,毛茛和棘毛翼蕨的遗传距离最近。在78%的遗传相似性下,聚类分析揭示了两个主要群体。类群1由4种组成,其中棘棘棘属是远亲,其他3种亲缘关系较近。另一方面,第2组有两个密切相关的绝种。结果表明,ISSR标记在蕨类植物的遗传研究中是有效的,提供的遗传多样性信息可用于蕨类观赏植物的选择、改良和保护。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Polymorphism and genetic diversity assessment of some ornamental ferns by microsatellite (ISSR) markers
This study assessed the genetic diversity of six ornamental ferns in parks and gardens in Nigeria using inter-simple sequence repeat (ISSR) markers. Genomic DNA were extracted from the samples and Polymerase Chain Reaction (PCR) was performed using seven ISSR markers. The elcetrophoregram showed amplicon size ranged from 100bp-1Kb among the ferns. A total of 87 bands were generated with 71.26 % polymorphism and 28.73 % monomorphic bands. The average number of band per primer was 12.4 and polymorphism range was between 31.23-100 %, the highest polymorphism was obtained with ISSR2. The mean Nei’s genetic diversity was 29 % while the Shannon’s index was 43.5 %. The pair of Adiatum capilus-veneris and Pteris acanthoneura had maximum genetic distance of 0.6592 while A. capilus-veneris and A. furcans are the closest species. At genetic similarity of 78 %, the cluster analysis revealed two major groups. Group-1 comprised of four species, where P. acanthoneura is a distant member, the other three species in the group are closely related. Group-2 on the other hand had two closely related Adiantum species. The study concludes that ISSR markers are effective in the genetic study of the ferns and the genetic diversity information provided could be utilized for selection, improvement and conservation of the ornamental plants.
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来源期刊
Journal of Applied Horticulture
Journal of Applied Horticulture Agricultural and Biological Sciences-Horticulture
CiteScore
0.90
自引率
0.00%
发文量
0
期刊介绍: The Journal of Applied Horticulture (JAH) is an official publication of the Society for the Advancement of Horticulture, founded in 1999. JAH is a triannual publication, publishes papers of original work (or results), & rapid communications and reviews on all aspects of Horticultural Science which can contribute to fundamental and applied research on horticultural plants and their related products. The essential contents of manuscripts must not have been published in other refereed publications. Submission of a manuscript to the Journal implies no concurrent submission elsewhere.
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