用对称适配微扰理论分解氨基酸残基上的Hofmeister效应

IF 2.9 Q3 CHEMISTRY, PHYSICAL
Kasimir P. Gregory, G. Webber, E. Wanless, A. Page
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引用次数: 3

摘要

霍夫梅斯特效应,以及更普遍的特定离子效应,在生物系统中被广泛观察到。然而,在许多情况下,在复杂的生物系统中,例如对特定离子具有高度特异性的离子通道,可能不会遵循Hofmeister系列。了解Hofmeister系列离子如何与蛋白质生成氨基酸相互作用,将有助于阐明为什么某些结合相互作用可能比其他结合相互作用更受青睐。利用对称适配微扰理论(SAPT2+3),研究了一系列阴离子与每种氨基酸之间的相互作用能。根据Hofmeister系列,以及随着氨基酸极性的增加(带负电荷的氨基酸侧链除外),相互作用强度变得更有利。此外,当它们同时涉及主链的侧链和两个质子部分时,相互作用通常是最有利的。这些阴离子-氨基酸复合物中的总相互作用能也主要由其静电成分决定,其方式与阴离子的þ(“o”)值成比例。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Decomposing Hofmeister effects on amino acid residues with symmetry adapted perturbation theory
Hofmeister effects, and more generally specific ion effects, are observed broadly in biological systems. However, there are many cases where the Hofmeister series might not be followed in complex biological systems, such as ion channels which can be highly specific to a particular ion. An understanding of how ions from the Hofmeister series interact with the proteinogenic amino acids will assist elucidation of why some binding interactions may be favoured over others. Using symmetry adapted perturbation theory (SAPT2 + 3), the interaction energies between a selection of anions and each amino acid have been investigated. The interaction strengths become more favourable in accordance with the Hofmeister series, and also with increasing polarity of the amino acids (with the exception of the negatively charged amino acid side chains). Furthermore, the interactions are generally most favourable when they simultaneously involve the side chain and both protic moieties of the backbone. The total interaction energy in these anion–amino acid complexes is also primarily determined by its electrostatic component, in a manner proportional to the þ (‘sho’) value of the anion.
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来源期刊
CiteScore
3.70
自引率
11.50%
发文量
46
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