Fugaku原子尺度上光与物质相互作用的大规模从头算模拟

IF 2.5 3区 计算机科学 Q2 COMPUTER SCIENCE, HARDWARE & ARCHITECTURE
Yuta Hirokawa, A. Yamada, S. Yamada, M. Noda, M. Uemoto, T. Boku, K. Yabana
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引用次数: 3

摘要

在光学科学领域,利用超短脉冲光在原子尺度上观察和操纵物质变得越来越重要。我们首次在扩展系统中对光电磁场的麦克斯韦方程、电子的含时Kohn-Sham方程和离子的牛顿方程进行了从头算模拟求解。在模拟中,最耗时的部分是电子轨道上的模板和非局部赝势运算,以及电子密度的快速傅立叶变换。代码优化是在富士通A64FX处理器上彻底执行,以实现最高性能。使用Fugaku超级计算机的27648个节点对由10000多个原子组成的非晶SiO2薄膜进行了模拟。仿真实现了出色的解决时间,鉴于内存带宽限制,性能接近最大可能值,以及出色的弱可扩展性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Large-scale ab initio simulation of light–matter interaction at the atomic scale in Fugaku
In the field of optical science, it is becoming increasingly important to observe and manipulate matter at the atomic scale using ultrashort pulsed light. For the first time, we have performed the ab initio simulation solving the Maxwell equation for light electromagnetic fields, the time-dependent Kohn-Sham equation for electrons, and the Newton equation for ions in extended systems. In the simulation, the most time-consuming parts were stencil and nonlocal pseudopotential operations on the electron orbitals as well as fast Fourier transforms for the electron density. Code optimization was thoroughly performed on the Fujitsu A64FX processor to achieve the highest performance. A simulation of amorphous SiO2 thin film composed of more than 10,000 atoms was performed using 27,648 nodes of the Fugaku supercomputer. The simulation achieved excellent time-to-solution with the performance close to the maximum possible value in view of the memory bandwidth bound, as well as excellent weak scalability.
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来源期刊
International Journal of High Performance Computing Applications
International Journal of High Performance Computing Applications 工程技术-计算机:跨学科应用
CiteScore
6.10
自引率
6.50%
发文量
32
审稿时长
>12 weeks
期刊介绍: With ever increasing pressure for health services in all countries to meet rising demands, improve their quality and efficiency, and to be more accountable; the need for rigorous research and policy analysis has never been greater. The Journal of Health Services Research & Policy presents the latest scientific research, insightful overviews and reflections on underlying issues, and innovative, thought provoking contributions from leading academics and policy-makers. It provides ideas and hope for solving dilemmas that confront all countries.
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