新城疫病毒平均死亡时间与实时PCR分型的实证比较

IF 0.1 N/A VETERINARY SCIENCES
S. Parthiban, J. Kirubaharan, A. Ramesh, M. Vidhya, S. Rajalakshmi, R. Rajasekaran, A. Thangavelu
{"title":"新城疫病毒平均死亡时间与实时PCR分型的实证比较","authors":"S. Parthiban, J. Kirubaharan, A. Ramesh, M. Vidhya, S. Rajalakshmi, R. Rajasekaran, A. Thangavelu","doi":"10.52635/eamr/12.1.69-73","DOIUrl":null,"url":null,"abstract":": Newcastle disease (ND) remains the most significant disease of poultry sector and contributes to huge economic loss. Early detection and pathotyping of Newcastle disease virus associated with field infection are highly crucial. In vivo pathogenicity assaying is sensitive and specific pathotyping tool used for detection and identification of NDV used until the recent past. Genome based sequence analysis yields promising results in virulence determination. Keeping the above facts, the present study was designed to compare the efficacy of conventional and molecular assays in NDV virulence determination. In this study twelve NDV isolates (Isolate numbers 463, 464, 475, 476, 122-17C, 122-17D, 122-17E, 128-17A, 128-17D, 137, 139, 141) available in the Department of Veterinary Microbiology, Madras Veterinary College (MVC), Chennai was subjected for differentiation of virulent and avirulent strains using mean death time (MDT) in specific pathogen-free (SPF) embryonated eggs and TaqMan minor groove binding (MGB) probe real-time PCR assay. Pathotyping based on the MDT revealed two NDV isolates (isolate no. 476 and 128-17D) as velogenic strains and the remaining ten NDV isolates as lentogenic strains. Pathotyping based on TaqMan MGB probe real-time PCR assay revealed six NDV isolates (476, 128-17D, 463, 464, 475, 137) as velogenic/mesogenic strains and remaining six NDV isolates (122-17C, 122-17D, 122-17E 128-17A, 139, 141) as lentogenic strains. Using a TaqMan MGB probe real-time PCR assay, four NDV isolates (463, 464, 475, 137) which were MDT pathotyped as lentogenic strains were re-pathotyped as velogenic/mesogenic strains, which indicates the greater sensitivity of TaqMan MGB probe real-time PCR assay in pathotyping of NDV over conventional MDT.","PeriodicalId":12112,"journal":{"name":"Exploratory Animal and Medical Research","volume":null,"pages":null},"PeriodicalIF":0.1000,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Pathotyping of Newcastle disease virus by mean death time and real-time PCR assay: an empirical comparison\",\"authors\":\"S. Parthiban, J. Kirubaharan, A. Ramesh, M. Vidhya, S. Rajalakshmi, R. Rajasekaran, A. Thangavelu\",\"doi\":\"10.52635/eamr/12.1.69-73\",\"DOIUrl\":null,\"url\":null,\"abstract\":\": Newcastle disease (ND) remains the most significant disease of poultry sector and contributes to huge economic loss. Early detection and pathotyping of Newcastle disease virus associated with field infection are highly crucial. In vivo pathogenicity assaying is sensitive and specific pathotyping tool used for detection and identification of NDV used until the recent past. Genome based sequence analysis yields promising results in virulence determination. Keeping the above facts, the present study was designed to compare the efficacy of conventional and molecular assays in NDV virulence determination. In this study twelve NDV isolates (Isolate numbers 463, 464, 475, 476, 122-17C, 122-17D, 122-17E, 128-17A, 128-17D, 137, 139, 141) available in the Department of Veterinary Microbiology, Madras Veterinary College (MVC), Chennai was subjected for differentiation of virulent and avirulent strains using mean death time (MDT) in specific pathogen-free (SPF) embryonated eggs and TaqMan minor groove binding (MGB) probe real-time PCR assay. Pathotyping based on the MDT revealed two NDV isolates (isolate no. 476 and 128-17D) as velogenic strains and the remaining ten NDV isolates as lentogenic strains. Pathotyping based on TaqMan MGB probe real-time PCR assay revealed six NDV isolates (476, 128-17D, 463, 464, 475, 137) as velogenic/mesogenic strains and remaining six NDV isolates (122-17C, 122-17D, 122-17E 128-17A, 139, 141) as lentogenic strains. Using a TaqMan MGB probe real-time PCR assay, four NDV isolates (463, 464, 475, 137) which were MDT pathotyped as lentogenic strains were re-pathotyped as velogenic/mesogenic strains, which indicates the greater sensitivity of TaqMan MGB probe real-time PCR assay in pathotyping of NDV over conventional MDT.\",\"PeriodicalId\":12112,\"journal\":{\"name\":\"Exploratory Animal and Medical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.1000,\"publicationDate\":\"2022-06-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Exploratory Animal and Medical Research\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.52635/eamr/12.1.69-73\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"N/A\",\"JCRName\":\"VETERINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Exploratory Animal and Medical Research","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.52635/eamr/12.1.69-73","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"N/A","JCRName":"VETERINARY SCIENCES","Score":null,"Total":0}
引用次数: 1

摘要

新城疫病(ND)仍然是家禽业最重要的疾病,造成巨大的经济损失。与田间感染相关的新城疫病毒的早期检测和病原分型至关重要。体内致病性测定是近年来用于检测和鉴定新城疫的一种灵敏、特异的病理分型方法。基于基因组的序列分析在毒力测定中产生了有希望的结果。基于上述事实,本研究旨在比较传统方法和分子方法在NDV毒力测定中的效果。本研究采用特异性无病原体(SPF)胚卵平均死亡时间(MDT)和TaqMan小槽结合(MGB)探针实时PCR技术,对金奈马德拉兽医学院(MVC)兽医微生物学系的12株NDV(分离株463、464、475、476、122-17C、122-17D、122-17E、128-17A、128-17D、137、139、141)进行了毒株和无毒株的鉴定。基于MDT的病理分型发现两个NDV分离株(分离株no.;476和128-17D)为速度源菌株,其余10株为慢源菌株。TaqMan MGB探针实时荧光定量PCR分型结果显示,6株NDV分离株(476、128-17D、463、464、475、137)为速生/中生菌株,其余6株(122-17C、122-17D、122-17E、128-17A、139、141)为慢生菌株。TaqMan MGB探针实时荧光定量PCR检测结果显示,4株NDV分离株(463、464、475、137)经MDT分型为慢致病性菌株后,重新分型为慢致病性/中致病性菌株,表明TaqMan MGB探针实时荧光定量PCR对NDV分型的敏感性高于传统MDT。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Pathotyping of Newcastle disease virus by mean death time and real-time PCR assay: an empirical comparison
: Newcastle disease (ND) remains the most significant disease of poultry sector and contributes to huge economic loss. Early detection and pathotyping of Newcastle disease virus associated with field infection are highly crucial. In vivo pathogenicity assaying is sensitive and specific pathotyping tool used for detection and identification of NDV used until the recent past. Genome based sequence analysis yields promising results in virulence determination. Keeping the above facts, the present study was designed to compare the efficacy of conventional and molecular assays in NDV virulence determination. In this study twelve NDV isolates (Isolate numbers 463, 464, 475, 476, 122-17C, 122-17D, 122-17E, 128-17A, 128-17D, 137, 139, 141) available in the Department of Veterinary Microbiology, Madras Veterinary College (MVC), Chennai was subjected for differentiation of virulent and avirulent strains using mean death time (MDT) in specific pathogen-free (SPF) embryonated eggs and TaqMan minor groove binding (MGB) probe real-time PCR assay. Pathotyping based on the MDT revealed two NDV isolates (isolate no. 476 and 128-17D) as velogenic strains and the remaining ten NDV isolates as lentogenic strains. Pathotyping based on TaqMan MGB probe real-time PCR assay revealed six NDV isolates (476, 128-17D, 463, 464, 475, 137) as velogenic/mesogenic strains and remaining six NDV isolates (122-17C, 122-17D, 122-17E 128-17A, 139, 141) as lentogenic strains. Using a TaqMan MGB probe real-time PCR assay, four NDV isolates (463, 464, 475, 137) which were MDT pathotyped as lentogenic strains were re-pathotyped as velogenic/mesogenic strains, which indicates the greater sensitivity of TaqMan MGB probe real-time PCR assay in pathotyping of NDV over conventional MDT.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
1.30
自引率
0.00%
发文量
16
审稿时长
20 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信