Rebecca N. Ram , Domenico Gadaleta , Timothy E.H. Allen
{"title":"“大数据”和“计算机”新方法在终止动物使用中的作用——进展评述","authors":"Rebecca N. Ram , Domenico Gadaleta , Timothy E.H. Allen","doi":"10.1016/j.comtox.2022.100232","DOIUrl":null,"url":null,"abstract":"<div><p><em>In silico</em><span> (computational) methods continue to evolve as part of a robust 21st century public health strategy in risk assessment, relevant to all sectors of chemical safety including preclinical drug discovery, industrial chemicals testing, food and cosmetics. Alongside </span><em>in vitro</em> methods as components of intelligent testing and pathway driven strategies, <em>in silico</em> models provide the potential for more human relevant solutions to the use of animals in safety testing and biomedical research. These are often termed ‘New Approach Methodologies’ (NAMs). Some NAMs incorporate the use of ‘big data’, for example the information provided from high throughput or high content <em>in vitro</em> screening assays or ‘omics’ technologies. Big data has increasing relevance to predictive toxicology but must be appropriately defined, particularly with regard to ‘quality vs quantity’. The purpose of this article is to provide a commentary on the progress of <em>in silico</em> human-based research methods within the context of NAMs, as well as discussion of the emerging use of big data with relevance to safety assessment. The current status of <em>in silico</em> methods is discussed, with input from researchers in the field. Scientific and legislative drivers for change are also considered, along with next steps to address challenges in funding and recognition, to achieve regulatory acceptance and uptake within the research community. To provide some wider context, the use of <em>in silico</em> methods alongside other relevant approaches (e.g., human-based <em>in vitro</em>) is also discussed.</p></div>","PeriodicalId":37651,"journal":{"name":"Computational Toxicology","volume":null,"pages":null},"PeriodicalIF":3.1000,"publicationDate":"2022-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"The role of ‘big data’ and ‘in silico’ New Approach Methodologies (NAMs) in ending animal use – A commentary on progress\",\"authors\":\"Rebecca N. Ram , Domenico Gadaleta , Timothy E.H. Allen\",\"doi\":\"10.1016/j.comtox.2022.100232\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p><em>In silico</em><span> (computational) methods continue to evolve as part of a robust 21st century public health strategy in risk assessment, relevant to all sectors of chemical safety including preclinical drug discovery, industrial chemicals testing, food and cosmetics. Alongside </span><em>in vitro</em> methods as components of intelligent testing and pathway driven strategies, <em>in silico</em> models provide the potential for more human relevant solutions to the use of animals in safety testing and biomedical research. These are often termed ‘New Approach Methodologies’ (NAMs). Some NAMs incorporate the use of ‘big data’, for example the information provided from high throughput or high content <em>in vitro</em> screening assays or ‘omics’ technologies. Big data has increasing relevance to predictive toxicology but must be appropriately defined, particularly with regard to ‘quality vs quantity’. The purpose of this article is to provide a commentary on the progress of <em>in silico</em> human-based research methods within the context of NAMs, as well as discussion of the emerging use of big data with relevance to safety assessment. The current status of <em>in silico</em> methods is discussed, with input from researchers in the field. Scientific and legislative drivers for change are also considered, along with next steps to address challenges in funding and recognition, to achieve regulatory acceptance and uptake within the research community. To provide some wider context, the use of <em>in silico</em> methods alongside other relevant approaches (e.g., human-based <em>in vitro</em>) is also discussed.</p></div>\",\"PeriodicalId\":37651,\"journal\":{\"name\":\"Computational Toxicology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.1000,\"publicationDate\":\"2022-08-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computational Toxicology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2468111322000202\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"TOXICOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computational Toxicology","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2468111322000202","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"TOXICOLOGY","Score":null,"Total":0}
The role of ‘big data’ and ‘in silico’ New Approach Methodologies (NAMs) in ending animal use – A commentary on progress
In silico (computational) methods continue to evolve as part of a robust 21st century public health strategy in risk assessment, relevant to all sectors of chemical safety including preclinical drug discovery, industrial chemicals testing, food and cosmetics. Alongside in vitro methods as components of intelligent testing and pathway driven strategies, in silico models provide the potential for more human relevant solutions to the use of animals in safety testing and biomedical research. These are often termed ‘New Approach Methodologies’ (NAMs). Some NAMs incorporate the use of ‘big data’, for example the information provided from high throughput or high content in vitro screening assays or ‘omics’ technologies. Big data has increasing relevance to predictive toxicology but must be appropriately defined, particularly with regard to ‘quality vs quantity’. The purpose of this article is to provide a commentary on the progress of in silico human-based research methods within the context of NAMs, as well as discussion of the emerging use of big data with relevance to safety assessment. The current status of in silico methods is discussed, with input from researchers in the field. Scientific and legislative drivers for change are also considered, along with next steps to address challenges in funding and recognition, to achieve regulatory acceptance and uptake within the research community. To provide some wider context, the use of in silico methods alongside other relevant approaches (e.g., human-based in vitro) is also discussed.
期刊介绍:
Computational Toxicology is an international journal publishing computational approaches that assist in the toxicological evaluation of new and existing chemical substances assisting in their safety assessment. -All effects relating to human health and environmental toxicity and fate -Prediction of toxicity, metabolism, fate and physico-chemical properties -The development of models from read-across, (Q)SARs, PBPK, QIVIVE, Multi-Scale Models -Big Data in toxicology: integration, management, analysis -Implementation of models through AOPs, IATA, TTC -Regulatory acceptance of models: evaluation, verification and validation -From metals, to small organic molecules to nanoparticles -Pharmaceuticals, pesticides, foods, cosmetics, fine chemicals -Bringing together the views of industry, regulators, academia, NGOs