富含GC重复序列扩增:相关疾病和机制

IF 0.8 4区 生物学 Q4 GENETICS & HEREDITY
Medizinische Genetik Pub Date : 2022-01-12 eCollection Date: 2021-12-01 DOI:10.1515/medgen-2021-2099
Christopher Schröder, Bernhard Horsthemke, Christel Depienne
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引用次数: 0

摘要

非编码重复扩增是众所周知的主要影响中枢神经系统的遗传性疾病的原因。常规诊断中使用的大多数标准技术都遗漏了病原性非编码重复扩增片段,因此必须使用特定技术(如重复引物PCR)或应用于基因组数据的特定生物信息学工具(如ExpansionHunter)来搜索。在这篇综述中,我们将重点放在富含gc的重复序列扩展上,它们至少占到目前所描述的所有非编码重复序列扩展的三分之一。富含gc的扩增主要位于基因的调控区域(启动子,5 '非翻译区,第一个内含子),并可能导致由RNA毒性和/或重复相关的非aug (RAN)翻译介导的毒性功能获得,或相关基因的功能丧失,这取决于它们的大小和甲基化状态。我们在此回顾与这些难以检测的扩张相关的疾病的临床和分子特征。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
GC-rich repeat expansions: associated disorders and mechanisms.

Noncoding repeat expansions are a well-known cause of genetic disorders mainly affecting the central nervous system. Missed by most standard technologies used in routine diagnosis, pathogenic noncoding repeat expansions have to be searched for using specific techniques such as repeat-primed PCR or specific bioinformatics tools applied to genome data, such as ExpansionHunter. In this review, we focus on GC-rich repeat expansions, which represent at least one third of all noncoding repeat expansions described so far. GC-rich expansions are mainly located in regulatory regions (promoter, 5' untranslated region, first intron) of genes and can lead to either a toxic gain-of-function mediated by RNA toxicity and/or repeat-associated non-AUG (RAN) translation, or a loss-of-function of the associated gene, depending on their size and their methylation status. We herein review the clinical and molecular characteristics of disorders associated with these difficult-to-detect expansions.

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来源期刊
Medizinische Genetik
Medizinische Genetik Medicine-Genetics (clinical)
CiteScore
1.40
自引率
9.10%
发文量
48
审稿时长
>12 weeks
期刊介绍: medizinischegenetik is a scientific journal that is owned and published by the German Society of Human Genetics e.V. since 1989. The journal was founded by Prof. Jan Murken, München. Self-published until 2006, from 2007-2019 published at Springer Verlag and since 2020 at De Gruyter. medizinischegenetik serves education and training among colleagues, the interdisciplinary exchange of knowledge in all areas of human genetics in clinics, practice, research and teaching. Each issue of the quarterly journal deals with a focus that provides a comprehensive overview of current developments in specific clinical pictures, technical developments and therapeutic approaches. All reviews are written in English language. The journal thus creates a platform for the international exchange of knowledge and increased awareness of German research activities in the scientific community. In addition, medizinischegenetik contains information on activities in its own subject in the German-language section. This includes conference reports, association announcements, personnel matters, statements and guidelines. With health policy questions, historical retrospectives and comments on current developments, the profession takes a stand on human genetic issues in Germany, Austria and Switzerland.
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