通过对其分布范围和系统基因组学的深度桑格测序,了解蓖麻目的真实规模,并正式确定了来自小安的列斯群岛的第一个物种

IF 2 2区 生物学 Q3 EVOLUTIONARY BIOLOGY
Ligia R. Benavides, Savel R. Daniels, Gonzalo Giribet
{"title":"通过对其分布范围和系统基因组学的深度桑格测序,了解蓖麻目的真实规模,并正式确定了来自小安的列斯群岛的第一个物种","authors":"Ligia R. Benavides,&nbsp;Savel R. Daniels,&nbsp;Gonzalo Giribet","doi":"10.1111/jzs.12546","DOIUrl":null,"url":null,"abstract":"<p>Ricinulei (hooded tick spiders or tick beetles), considered one of the smaller arachnid orders, is an ancient clade whose affinities are still debated. With three recognized genera, short-range endemism, and strict fidelity to the landmasses that have seen them evolve for hundreds of millions of years, the group has emerged as a novel system to understand deep biogeographic processes. Here we undertake a combined approach using phylotranscriptomics and deep Sanger sequencing of 133 ricinuleid specimens to better understand their relationships, divergence times, and species ranges by using a series of species delimitation analyses. Our results support the monophyly of the three recognized genera, <i>Ricinoides</i> in Africa, <i>Pseudocellus</i> in North America, and <i>Cryptocellus</i> in Mesoamerica and South America. <i>Ricinoides</i> is further divided into two or three deep clades corresponding to different ancestral forest refugia, and the sampled <i>Cryptocellus</i> segregate into a Mesoamerican and a South American clade, but a new species from Tobago is the sister group to the Mesoamerican clade in the transcriptomic analysis and not part of the South American clade. Despite not being known from adults, but given the fact that this is the only Ricinulei species from the Lesser Antilles and its pivotal phylogenetic position, the species is here formalized as <i>Cryptocellus tobagoensis</i> Giribet &amp; Benavides <b>sp. nov.</b> Finally, species delimitation methods generally do well recognizing morphospecies, but they are unable to distinguish among some of them, suggesting the need for re-study of some of these species complexes and perhaps synonymy.</p>","PeriodicalId":54751,"journal":{"name":"Journal of Zoological Systematics and Evolutionary Research","volume":null,"pages":null},"PeriodicalIF":2.0000,"publicationDate":"2021-11-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Understanding the real magnitude of the arachnid order Ricinulei through deep Sanger sequencing across its distribution range and phylogenomics, with the formalization of the first species from the Lesser Antilles\",\"authors\":\"Ligia R. Benavides,&nbsp;Savel R. Daniels,&nbsp;Gonzalo Giribet\",\"doi\":\"10.1111/jzs.12546\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Ricinulei (hooded tick spiders or tick beetles), considered one of the smaller arachnid orders, is an ancient clade whose affinities are still debated. With three recognized genera, short-range endemism, and strict fidelity to the landmasses that have seen them evolve for hundreds of millions of years, the group has emerged as a novel system to understand deep biogeographic processes. Here we undertake a combined approach using phylotranscriptomics and deep Sanger sequencing of 133 ricinuleid specimens to better understand their relationships, divergence times, and species ranges by using a series of species delimitation analyses. Our results support the monophyly of the three recognized genera, <i>Ricinoides</i> in Africa, <i>Pseudocellus</i> in North America, and <i>Cryptocellus</i> in Mesoamerica and South America. <i>Ricinoides</i> is further divided into two or three deep clades corresponding to different ancestral forest refugia, and the sampled <i>Cryptocellus</i> segregate into a Mesoamerican and a South American clade, but a new species from Tobago is the sister group to the Mesoamerican clade in the transcriptomic analysis and not part of the South American clade. Despite not being known from adults, but given the fact that this is the only Ricinulei species from the Lesser Antilles and its pivotal phylogenetic position, the species is here formalized as <i>Cryptocellus tobagoensis</i> Giribet &amp; Benavides <b>sp. nov.</b> Finally, species delimitation methods generally do well recognizing morphospecies, but they are unable to distinguish among some of them, suggesting the need for re-study of some of these species complexes and perhaps synonymy.</p>\",\"PeriodicalId\":54751,\"journal\":{\"name\":\"Journal of Zoological Systematics and Evolutionary Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2021-11-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Zoological Systematics and Evolutionary Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/jzs.12546\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"EVOLUTIONARY BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Zoological Systematics and Evolutionary Research","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/jzs.12546","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"EVOLUTIONARY BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

蜱虫(有帽蜱蛛或蜱虫),被认为是较小的蛛形纲之一,是一个古老的分支,其亲缘关系仍有争议。有了三个公认的属,短距离的地方性,以及对陆地的严格忠诚,它们已经进化了数亿年,这个群体已经成为一个理解深层生物地理过程的新系统。本研究采用系统转录组学和深度桑格测序相结合的方法,对133个蓖麻属样本进行了一系列物种划分分析,以更好地了解它们的关系、分化时间和物种范围。我们的研究结果支持三个公认属的单一性,即非洲的蓖麻属,北美的伪虫属,中美洲和南美洲的隐虫属。蓖麻属进一步划分为两个或三个深层分支,对应于不同的祖先森林避难所,采样的隐细胞属分为中美洲和南美洲分支,但来自多巴哥的一个新种在转录组学分析中是中美洲分支的姐妹群,而不是南美洲分支的一部分。尽管没有从成虫中得知,但考虑到这是小安的列斯群岛唯一的蓖麻属物种及其关键的系统发育地位,该物种在这里被正式命名为Cryptocellus tobagoensis Giribet;最后,物种划分方法通常可以很好地识别形态种,但它们无法区分其中的一些,这表明需要重新研究这些物种复合体和可能的同义词。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Understanding the real magnitude of the arachnid order Ricinulei through deep Sanger sequencing across its distribution range and phylogenomics, with the formalization of the first species from the Lesser Antilles

Understanding the real magnitude of the arachnid order Ricinulei through deep Sanger sequencing across its distribution range and phylogenomics, with the formalization of the first species from the Lesser Antilles

Ricinulei (hooded tick spiders or tick beetles), considered one of the smaller arachnid orders, is an ancient clade whose affinities are still debated. With three recognized genera, short-range endemism, and strict fidelity to the landmasses that have seen them evolve for hundreds of millions of years, the group has emerged as a novel system to understand deep biogeographic processes. Here we undertake a combined approach using phylotranscriptomics and deep Sanger sequencing of 133 ricinuleid specimens to better understand their relationships, divergence times, and species ranges by using a series of species delimitation analyses. Our results support the monophyly of the three recognized genera, Ricinoides in Africa, Pseudocellus in North America, and Cryptocellus in Mesoamerica and South America. Ricinoides is further divided into two or three deep clades corresponding to different ancestral forest refugia, and the sampled Cryptocellus segregate into a Mesoamerican and a South American clade, but a new species from Tobago is the sister group to the Mesoamerican clade in the transcriptomic analysis and not part of the South American clade. Despite not being known from adults, but given the fact that this is the only Ricinulei species from the Lesser Antilles and its pivotal phylogenetic position, the species is here formalized as Cryptocellus tobagoensis Giribet & Benavides sp. nov. Finally, species delimitation methods generally do well recognizing morphospecies, but they are unable to distinguish among some of them, suggesting the need for re-study of some of these species complexes and perhaps synonymy.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
5.60
自引率
0.00%
发文量
13
审稿时长
>12 weeks
期刊介绍: The Journal of Zoological Systematics and Evolutionary Research (JZSER)is a peer-reviewed, international forum for publication of high-quality research on systematic zoology and evolutionary biology. The aim of the journal is to provoke a synthesis of results from morphology, physiology, animal geography, ecology, ethology, evolutionary genetics, population genetics, developmental biology and molecular biology. Besides empirical papers, theoretical contributions and review articles are welcome. Integrative and interdisciplinary contributions are particularly preferred. Purely taxonomic and predominantly cytogenetic manuscripts will not be accepted except in rare cases, and then only at the Editor-in-Chief''s discretion. The same is true for phylogenetic studies based solely on mitochondrial marker sequences without any additional methodological approach. To encourage scientific exchange and discussions, authors are invited to send critical comments on previously published articles. Only papers in English language are accepted.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信