Jed A. Long, Stephen L. Webb, Seth M. Harju, Kenneth L. Gee
{"title":"使用wildlifeDI R软件包分析高频跟踪数据中的接触和行为","authors":"Jed A. Long, Stephen L. Webb, Seth M. Harju, Kenneth L. Gee","doi":"10.1111/gean.12303","DOIUrl":null,"url":null,"abstract":"<p>Inter-individual interactions are one of the key factors driving patterns of wildlife movement; however, methods for capturing and analyzing inter-individual interactions from wildlife tracking data remain limited. Extracting contacts from wildlife tracking data is a challenge owing to the complex spatial and temporal patterns and the volume of tracking data sets. Knowledge of the time and location of contacts are crucial to understanding the spatiotemporal patterns of contacts and how they relate to the environment, individual behavior, and social structure. In this article we introduce a new suite of functions in the wildlifeDI R package for automating contact analysis, summaries, and outputs (e.g., visualizations) from studies tracking many individuals simultaneously, building upon the existing methods for studying interactive behavior between dyads already present within the package. The package has applications to study contact and interaction for the study of animal behavior, social networks, and disease transmission. We demonstrate two applications of contact analysis using the wildlifeDI package: female white-tailed deer (<i>Odocoileus virginianus</i>) contacts and contacts between hunters and male white-tailed deer. The wildlifeDI package represents a new set of advanced, reproducible analyses to identify and study contacts and interactions in wildlife tracking studies. We designed the analyses and outputs to integrate into existing R analysis workflows to facilitate adoption of the package into a wide variety of wildlife tracking studies.</p>","PeriodicalId":12533,"journal":{"name":"Geographical Analysis","volume":"54 3","pages":"648-663"},"PeriodicalIF":3.3000,"publicationDate":"2021-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1111/gean.12303","citationCount":"5","resultStr":"{\"title\":\"Analyzing Contacts and Behavior from High Frequency Tracking Data Using the wildlifeDI R Package\",\"authors\":\"Jed A. Long, Stephen L. Webb, Seth M. Harju, Kenneth L. Gee\",\"doi\":\"10.1111/gean.12303\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Inter-individual interactions are one of the key factors driving patterns of wildlife movement; however, methods for capturing and analyzing inter-individual interactions from wildlife tracking data remain limited. Extracting contacts from wildlife tracking data is a challenge owing to the complex spatial and temporal patterns and the volume of tracking data sets. Knowledge of the time and location of contacts are crucial to understanding the spatiotemporal patterns of contacts and how they relate to the environment, individual behavior, and social structure. In this article we introduce a new suite of functions in the wildlifeDI R package for automating contact analysis, summaries, and outputs (e.g., visualizations) from studies tracking many individuals simultaneously, building upon the existing methods for studying interactive behavior between dyads already present within the package. The package has applications to study contact and interaction for the study of animal behavior, social networks, and disease transmission. We demonstrate two applications of contact analysis using the wildlifeDI package: female white-tailed deer (<i>Odocoileus virginianus</i>) contacts and contacts between hunters and male white-tailed deer. The wildlifeDI package represents a new set of advanced, reproducible analyses to identify and study contacts and interactions in wildlife tracking studies. We designed the analyses and outputs to integrate into existing R analysis workflows to facilitate adoption of the package into a wide variety of wildlife tracking studies.</p>\",\"PeriodicalId\":12533,\"journal\":{\"name\":\"Geographical Analysis\",\"volume\":\"54 3\",\"pages\":\"648-663\"},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2021-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1111/gean.12303\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Geographical Analysis\",\"FirstCategoryId\":\"89\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/gean.12303\",\"RegionNum\":3,\"RegionCategory\":\"地球科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"GEOGRAPHY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Geographical Analysis","FirstCategoryId":"89","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/gean.12303","RegionNum":3,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"GEOGRAPHY","Score":null,"Total":0}
Analyzing Contacts and Behavior from High Frequency Tracking Data Using the wildlifeDI R Package
Inter-individual interactions are one of the key factors driving patterns of wildlife movement; however, methods for capturing and analyzing inter-individual interactions from wildlife tracking data remain limited. Extracting contacts from wildlife tracking data is a challenge owing to the complex spatial and temporal patterns and the volume of tracking data sets. Knowledge of the time and location of contacts are crucial to understanding the spatiotemporal patterns of contacts and how they relate to the environment, individual behavior, and social structure. In this article we introduce a new suite of functions in the wildlifeDI R package for automating contact analysis, summaries, and outputs (e.g., visualizations) from studies tracking many individuals simultaneously, building upon the existing methods for studying interactive behavior between dyads already present within the package. The package has applications to study contact and interaction for the study of animal behavior, social networks, and disease transmission. We demonstrate two applications of contact analysis using the wildlifeDI package: female white-tailed deer (Odocoileus virginianus) contacts and contacts between hunters and male white-tailed deer. The wildlifeDI package represents a new set of advanced, reproducible analyses to identify and study contacts and interactions in wildlife tracking studies. We designed the analyses and outputs to integrate into existing R analysis workflows to facilitate adoption of the package into a wide variety of wildlife tracking studies.
期刊介绍:
First in its specialty area and one of the most frequently cited publications in geography, Geographical Analysis has, since 1969, presented significant advances in geographical theory, model building, and quantitative methods to geographers and scholars in a wide spectrum of related fields. Traditionally, mathematical and nonmathematical articulations of geographical theory, and statements and discussions of the analytic paradigm are published in the journal. Spatial data analyses and spatial econometrics and statistics are strongly represented.