当前生物医学和生物制药的新计算方法

IF 2.4 3区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS
Lei Chen
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引用次数: 0

摘要

目的与范围:随着生物医药和生物制药高通量技术的发展和应用,创造了这些领域的巨大信息。许多公共和商业数据库已经建立起来存储这些信息并提供服务,如GEO、TCGA、KEGG、DrugBank等。随着时间的推移,他们中的许多人已经更新了几次,增加了新的信息。对于特定的生物医学和生物制药问题,研究人员有很多选择来选择有用的信息,这与十年前的情况有很大的不同。然而,不同数据库中的信息,甚至同一数据库中的信息,可能具有不同的结构和组织形式。如何将不同结构和组织形式的信息融合成统一的格式,从而为下游的调查提供信息,是一个巨大的挑战。另一方面,计算机技术变得越来越强大。近年来,一些先进的计算机算法(如深度学习、网络嵌入)被提出。这些算法总是在基准数据集上产生良好的性能,并在许多领域得到了成功的应用。然而,它们在生物医学和生物制药方面的应用有限。这些强大的计算机算法与具有复杂表征的特定生物医学和生物制药问题之间存在很大差距。因此,本文提出了一种利用新颖的计算方法来处理具有复杂表示的生物医学和生物制药问题的特刊。编辑专家收集应用新提出的计算机算法或设计适合和有效的算法解决不同生物医学和生物制药问题的研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Novel Computational Methods in Current Biomedicine and Biopharmacy
Aims & Scope: With the development and application of high throughput technologies on biomedicine and biopharmacy, huge information in these fields has been created. Lots of public and commercial databases have been set up to store this information and provide services, such as GEO, TCGA, KEGG, DrugBank, etc. Many of them have been updated several times as time goes on, novel information is added. For a specific biomedicine and biopharmacy problem, investigators have lots of choices to select useful information, which is great different from the case about ten years ago. However, information in different databases, even in the same database, may have different structures and organization forms. How to fuse information with different structures and organization forms into a uniform format, thereby feeding into the downstream investigation, is a great challenge. On the other hand, computer technologies become more and more powerful. Several advanced computer algorithms (e.g., deep learning, network embedding) have been proposed in recent years. These algorithms always yield good performance on benchmark datasets and have successful applications in many areas. However, their applications on biomedicine and biopharmacy are limited. There exists a great gap between these powerful computer algorithms and specific biomedicine and biopharmacy problems with complex representations. Therefore, this special issue, which focuses on dealing with biomedicine and biopharmacy problems with complex representations via novel computational methods, is proposed. The editor experts to collect studies that applies newly proposed computer algorithms or designs suitable and effective algorithms on different biomedicine and biopharmacy problems.
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来源期刊
Current Bioinformatics
Current Bioinformatics 生物-生化研究方法
CiteScore
6.60
自引率
2.50%
发文量
77
审稿时长
>12 weeks
期刊介绍: Current Bioinformatics aims to publish all the latest and outstanding developments in bioinformatics. Each issue contains a series of timely, in-depth/mini-reviews, research papers and guest edited thematic issues written by leaders in the field, covering a wide range of the integration of biology with computer and information science. The journal focuses on advances in computational molecular/structural biology, encompassing areas such as computing in biomedicine and genomics, computational proteomics and systems biology, and metabolic pathway engineering. Developments in these fields have direct implications on key issues related to health care, medicine, genetic disorders, development of agricultural products, renewable energy, environmental protection, etc.
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