金枪鱼的基因识别和多样性落在东anan和PPP Muncar,使用线粒体D-loop

Enex Yuniarti Ningsih, Elok Faiqoh, Ida Ayu Astarini, Putu Dian Pertiwi, Andrianus Sembiring, Ni Luh Astria Yusmalinda, Muhammad Danie Al Malik
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引用次数: 0

摘要

长尾金枪鱼(Thunnus tonggol)是一种典型的浅海生物,其迁徙模式遵循洋流。目前,该物种尚未在印度尼西亚水域得到广泛研究,因此有必要对其形态和遗传多样性进行鉴定。本研究采用的分子方法是使用线粒体D–loop基因座进行DNA条形码。这项研究可以解释物种遗传信息在稳定性和恢复力方面的重要性。本研究旨在确定位于Kedonganan、Bali和PPP Muncar、Banyuwangi的两个地点的长尾金枪鱼的形态、系统发育和遗传多样性。分子分析分几个阶段进行,即DNA提取、聚合酶链式反应、电泳和测序。根据测序和分析结果,共发现33个长尾金枪鱼样本。从两个位置重建系统发育树的结果显示,在所有近亲样本中,一个分支的遗传距离值在0.000–0.042之间。单体型多样性(Hd)值为0.9905,核苷酸多样性(?)值为0.020。遗传多样性的高值表明,两个长尾金枪鱼种群具有较高的适应环境变化的生存能力。指数固定分析(Fst)的值为0.0299,p值>0.05。指数固定值表明没有显著的群体差异。这项研究的结果可作为规划遗传保护战略和可持续渔业管理工作的基础数据。关键词:金枪鱼;桐;遗传标记
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Identifikasi dan Keragaman Genetik Longtail Tuna (Thunnus tonggol) Yang Didaratkan di PPI Kedonganan dan PPP Muncar Menggunakan Marka D-loop Mitokondria
Longtail tuna (Thunnus tonggol) is one of the oceanodromus neritic species and the migration pattern follows the water currents. Currently, this species has not been widely studied in Indonesian waters, so it is nesessary to study the identification of morphology and genetic diversity. The molecular approach employed in this study is DNA barcoding using mitochondrial D – loop locus. This study can explain the importance of species genetic information in stability and resilience. This study aims to determine the identification of morphology, phylogenetic and genetic diversity of longtail tuna at two locations in PPI Kedonganan, Bali dan PPP Muncar, Banyuwangi. The molecular analysis was done in several stages, i.e DNA extraction, Polymerase Chain Reaction, electrophoresis and sequencing. Based on the result of sequencing and analysis, 33 samples of longtail tuna was found. The result of phylogenetic tree reconstruction from two locations showed one clade with genetic distance value among longtail tuna species ranging from 0.000 – 0.042 for all close kinship samples. The haplotype diversity (Hd) value of longtail tuna was 0.9905 and nucleotide diversity (?) was 0.020. The high value of genetic diversity indicated that two longtail tuna populations have a high survival ability to adapt on environmental changes. Index fixation analysis (Fst) has a value of 0.0299, p - value > 0.05. The index fixation value indicated no significant population difference. The result of this study can be use as basic data in planning genetic conservation strategies with sustainable fisheries management efforts. Keywords: Tuna; Thunnus tonggol; Genetic Marker
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