在稀释实验中检测食物对细菌生长的限制

IF 2.6 3区 地球科学 Q2 OCEANOGRAPHY
Krzysztof Rychert
{"title":"在稀释实验中检测食物对细菌生长的限制","authors":"Krzysztof Rychert","doi":"10.1016/j.oceano.2022.02.001","DOIUrl":null,"url":null,"abstract":"<div><p>The dilution method is typically applied to estimate the growth and mortality rates of phytoplankton, but it is also used to study bacterioplankton. The method comprises creating a gradient of dilutions to reduce the encounter rates between bacterivores and bacteria, thus allowing for estimations of bacterial growth and grazing pressure exerted on the bacteria. However, the manipulations involved in the method can lead to biased results. In this study, 12 dilution experiments performed in the coastal zone of the Baltic Sea were accompanied by additional measurements capable of detecting possible artefacts. Only six measurements performed during spring and summer (March–August) produced results that were free of artefacts and were statistically significant. During fall and winter (October–February) measurements were unsuccessful because of food limitation of bacterial growth during experimental incubation. Twice (in September and October) bacterial growth and grazing mortality rates were underestimated because grazing pressure was not successfully removed. The study demonstrated that 24-hour and five-day oxygen consumption measurements incorporated into dilution experiments permitted estimating the fraction of biodegradable organic matter used during incubation, and, thus, detecting the food limitation of bacterial growth.</p></div>","PeriodicalId":54694,"journal":{"name":"Oceanologia","volume":null,"pages":null},"PeriodicalIF":2.6000,"publicationDate":"2022-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0078323422000185/pdfft?md5=7a461a5af075272972a59e0a6a61d66d&pid=1-s2.0-S0078323422000185-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Detecting food limitation of bacterial growth during dilution experiments\",\"authors\":\"Krzysztof Rychert\",\"doi\":\"10.1016/j.oceano.2022.02.001\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The dilution method is typically applied to estimate the growth and mortality rates of phytoplankton, but it is also used to study bacterioplankton. The method comprises creating a gradient of dilutions to reduce the encounter rates between bacterivores and bacteria, thus allowing for estimations of bacterial growth and grazing pressure exerted on the bacteria. However, the manipulations involved in the method can lead to biased results. In this study, 12 dilution experiments performed in the coastal zone of the Baltic Sea were accompanied by additional measurements capable of detecting possible artefacts. Only six measurements performed during spring and summer (March–August) produced results that were free of artefacts and were statistically significant. During fall and winter (October–February) measurements were unsuccessful because of food limitation of bacterial growth during experimental incubation. Twice (in September and October) bacterial growth and grazing mortality rates were underestimated because grazing pressure was not successfully removed. The study demonstrated that 24-hour and five-day oxygen consumption measurements incorporated into dilution experiments permitted estimating the fraction of biodegradable organic matter used during incubation, and, thus, detecting the food limitation of bacterial growth.</p></div>\",\"PeriodicalId\":54694,\"journal\":{\"name\":\"Oceanologia\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2022-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0078323422000185/pdfft?md5=7a461a5af075272972a59e0a6a61d66d&pid=1-s2.0-S0078323422000185-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Oceanologia\",\"FirstCategoryId\":\"89\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0078323422000185\",\"RegionNum\":3,\"RegionCategory\":\"地球科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"OCEANOGRAPHY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Oceanologia","FirstCategoryId":"89","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0078323422000185","RegionNum":3,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"OCEANOGRAPHY","Score":null,"Total":0}
引用次数: 0

摘要

稀释法通常用于估算浮游植物的生长和死亡率,但也用于研究浮游细菌。该方法包括创建稀释梯度以减少细菌和细菌之间的相遇率,从而允许估计细菌生长和施加在细菌上的放牧压力。然而,该方法中涉及的操作可能导致有偏差的结果。在这项研究中,在波罗的海沿海地区进行了12次稀释实验,并进行了能够检测可能的人工制品的额外测量。只有在春季和夏季(3月至8月)进行的6次测量产生了没有人工制品的结果,并且具有统计学意义。在秋季和冬季(10 - 2月),由于实验孵化期间食物对细菌生长的限制,测量不成功。由于放牧压力没有成功消除,两次(9月和10月)细菌生长和放牧死亡率被低估。该研究表明,将24小时和5天的耗氧量测量与稀释实验结合起来,可以估计在孵育过程中使用的可生物降解有机物的比例,从而检测细菌生长的食物限制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Detecting food limitation of bacterial growth during dilution experiments

The dilution method is typically applied to estimate the growth and mortality rates of phytoplankton, but it is also used to study bacterioplankton. The method comprises creating a gradient of dilutions to reduce the encounter rates between bacterivores and bacteria, thus allowing for estimations of bacterial growth and grazing pressure exerted on the bacteria. However, the manipulations involved in the method can lead to biased results. In this study, 12 dilution experiments performed in the coastal zone of the Baltic Sea were accompanied by additional measurements capable of detecting possible artefacts. Only six measurements performed during spring and summer (March–August) produced results that were free of artefacts and were statistically significant. During fall and winter (October–February) measurements were unsuccessful because of food limitation of bacterial growth during experimental incubation. Twice (in September and October) bacterial growth and grazing mortality rates were underestimated because grazing pressure was not successfully removed. The study demonstrated that 24-hour and five-day oxygen consumption measurements incorporated into dilution experiments permitted estimating the fraction of biodegradable organic matter used during incubation, and, thus, detecting the food limitation of bacterial growth.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Oceanologia
Oceanologia 地学-海洋学
CiteScore
5.30
自引率
6.90%
发文量
63
审稿时长
146 days
期刊介绍: Oceanologia is an international journal that publishes results of original research in the field of marine sciences with emphasis on the European seas.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信