一种基于机器学习的DNA序列分类方法

Q2 Nursing
Sapna Juneja
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引用次数: 1

摘要

通过相关的历史数据,包括生物信息学领域,机器学习(ML)在优化决策方面发挥了重要作用。在生物信息学中,对自然基因和被疾病感染的基因进行分类是一项非常复杂的任务。为了通过基因组研究发现新鲜蛋白的适用性,需要对DNA序列进行分类。目前的工作是使用机器学习算法识别DNA序列的类别。这些类别基本上取决于核苷酸的序列。在序列中有一个小的突变,在类中就有一个相应的变化。代表一个类的每个数字实例都与一个基因家族相关联,包括G蛋白偶联受体、酪氨酸激酶、合成酶等。在本文中,我们对三种类型的数据集应用了分类算法来识别它们属于哪个基因类。我们将序列转换为具有定义长度的子字符串。这个“k值”定义了子字符串的长度,这是分析序列的一种方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
An Approach to DNA Sequence Classification through Machine Learning
Machine learning (ML) has been instrumental in optimal decision making through relevant historical data, including the domain of Bioinformatics. In bioinformatics classification of natural genes and the genes that are infected by disease called invalid gene is a very complex task. In order to find the applicability of a Fresh Protein through Genomic research, DNA sequences are needed to be classified. The current work identifies classes of DNA sequence using Machine Learning algorithm. These classes are basically dependent on the sequence of nucleotides. With a fractional mutation in sequence there is a corresponding change in the class. Each numeric instance representing a class is linked to a Gene family including G protein coupled receptors, tyrosine kinase, synthase etc. In this paper, we applied the classification algorithm on three types of datasets to identify which gene class they belongs to. We converted sequences into substrings with a defined length. That ‘k value’ defines the length of substring which is one of the way to analyze the sequence.
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CiteScore
3.20
自引率
0.00%
发文量
43
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