M. Porfiri, M. Karakaya, Raghu Ram Sattanapalle, S. Peterson
{"title":"斑马鱼成对游动模式的出现","authors":"M. Porfiri, M. Karakaya, Raghu Ram Sattanapalle, S. Peterson","doi":"10.1017/flo.2021.5","DOIUrl":null,"url":null,"abstract":"Graphical Abstract Mathematical models promise new insights into the mechanisms underlying the emergence of collective behaviour in fish. Here, we establish a mathematical model to examine collective behaviour of zebrafish, a popular animal species in preclinical research. The model accounts for social and hydrodynamic interactions between individuals, along with the burst-and-coast swimming style of zebrafish. Each fish is described as a system of coupled stochastic differential equations, which govern the time evolution of their speed and turn rate. Model parameters are calibrated using experimental observations of zebrafish pairs swimming in a shallow water tank. The model successfully captures the main features of the collective response of the animals, by predicting their preference to swim in-line, with one fish leading and the other trailing. During in-line swimming, the animals share the same orientation and keep a distance from each other, owing to hydrodynamic repulsion. Hydrodynamic interaction is also responsible for an increase in the speed of the pair swimming in-line. By linearizing the equations of motion, we demonstrate local stability of in-line swimming to small perturbations for a wide range of model parameters. Mathematically backed results presented herein support the application of dynamical systems theory to unveil the inner workings of fish collective behaviour.","PeriodicalId":93752,"journal":{"name":"Flow (Cambridge, England)","volume":" ","pages":""},"PeriodicalIF":2.8000,"publicationDate":"2021-08-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"6","resultStr":"{\"title\":\"Emergence of in-line swimming patterns in zebrafish pairs\",\"authors\":\"M. Porfiri, M. Karakaya, Raghu Ram Sattanapalle, S. Peterson\",\"doi\":\"10.1017/flo.2021.5\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Graphical Abstract Mathematical models promise new insights into the mechanisms underlying the emergence of collective behaviour in fish. Here, we establish a mathematical model to examine collective behaviour of zebrafish, a popular animal species in preclinical research. The model accounts for social and hydrodynamic interactions between individuals, along with the burst-and-coast swimming style of zebrafish. Each fish is described as a system of coupled stochastic differential equations, which govern the time evolution of their speed and turn rate. Model parameters are calibrated using experimental observations of zebrafish pairs swimming in a shallow water tank. The model successfully captures the main features of the collective response of the animals, by predicting their preference to swim in-line, with one fish leading and the other trailing. During in-line swimming, the animals share the same orientation and keep a distance from each other, owing to hydrodynamic repulsion. Hydrodynamic interaction is also responsible for an increase in the speed of the pair swimming in-line. By linearizing the equations of motion, we demonstrate local stability of in-line swimming to small perturbations for a wide range of model parameters. Mathematically backed results presented herein support the application of dynamical systems theory to unveil the inner workings of fish collective behaviour.\",\"PeriodicalId\":93752,\"journal\":{\"name\":\"Flow (Cambridge, England)\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2021-08-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"6\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Flow (Cambridge, England)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1017/flo.2021.5\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MECHANICS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Flow (Cambridge, England)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1017/flo.2021.5","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MECHANICS","Score":null,"Total":0}
Emergence of in-line swimming patterns in zebrafish pairs
Graphical Abstract Mathematical models promise new insights into the mechanisms underlying the emergence of collective behaviour in fish. Here, we establish a mathematical model to examine collective behaviour of zebrafish, a popular animal species in preclinical research. The model accounts for social and hydrodynamic interactions between individuals, along with the burst-and-coast swimming style of zebrafish. Each fish is described as a system of coupled stochastic differential equations, which govern the time evolution of their speed and turn rate. Model parameters are calibrated using experimental observations of zebrafish pairs swimming in a shallow water tank. The model successfully captures the main features of the collective response of the animals, by predicting their preference to swim in-line, with one fish leading and the other trailing. During in-line swimming, the animals share the same orientation and keep a distance from each other, owing to hydrodynamic repulsion. Hydrodynamic interaction is also responsible for an increase in the speed of the pair swimming in-line. By linearizing the equations of motion, we demonstrate local stability of in-line swimming to small perturbations for a wide range of model parameters. Mathematically backed results presented herein support the application of dynamical systems theory to unveil the inner workings of fish collective behaviour.