基于改进二元克隆花授粉算法的高维生物医学数据特征选择方法

IF 1.1 4区 生物学 Q4 GENETICS & HEREDITY
Human Heredity Pub Date : 2019-08-29 DOI:10.1159/000501652
Chaokun Yan, Jingjing Ma, Huimin Luo, Ge Zhang, Junwei Luo
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引用次数: 21

摘要

在生物医学领域,大量的生物学和临床数据已经迅速积累,可以对这些数据进行分析,以强调对高危患者的评估并改进诊断。然而,生物医学数据分析遇到的一个主要挑战是所谓的“维度诅咒”。针对这个问题,提出了一种基于改进的二元克隆花授粉算法的新特征选择方法,以消除不必要的特征,并确保疾病的高精度分类。采用绝对平衡群策略和自适应高斯变异,可以增加种群的多样性,提高搜索性能。KNN分类器用于评估分类的准确性。在六个公开的高维生物医学数据集上的大量实验结果表明,该方法可以获得高分类精度,并优于其他最先进的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Novel Feature Selection Method for High-Dimensional Biomedical Data Based on an Improved Binary Clonal Flower Pollination Algorithm
In the biomedical field, large amounts of biological and clinical data have been accumulated rapidly, which can be analyzed to emphasize the assessment of at-risk patients and improve diagnosis. However, a major challenge encountered associated with biomedical data analysis is the so-called “curse of dimensionality.” For this issue, a novel feature selection method based on an improved binary clonal flower pollination algorithm is proposed to eliminate unnecessary features and ensure a highly accurate classification of disease. The absolute balance group strategy and adaptive Gaussian mutation are adopted, which can increase the diversity of the population and improve the search performance. The KNN classifier is used to evaluate the classification accuracy. Extensive experimental results in six, publicly available, high-dimensional, biomedical datasets show that the proposed method can obtain high classification accuracy and outperforms other state-of-the-art methods.
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来源期刊
Human Heredity
Human Heredity 生物-遗传学
CiteScore
2.50
自引率
0.00%
发文量
12
审稿时长
>12 weeks
期刊介绍: Gathering original research reports and short communications from all over the world, ''Human Heredity'' is devoted to methodological and applied research on the genetics of human populations, association and linkage analysis, genetic mechanisms of disease, and new methods for statistical genetics, for example, analysis of rare variants and results from next generation sequencing. The value of this information to many branches of medicine is shown by the number of citations the journal receives in fields ranging from immunology and hematology to epidemiology and public health planning, and the fact that at least 50% of all ''Human Heredity'' papers are still cited more than 8 years after publication (according to ISI Journal Citation Reports). Special issues on methodological topics (such as ‘Consanguinity and Genomics’ in 2014; ‘Analyzing Rare Variants in Complex Diseases’ in 2012) or reviews of advances in particular fields (‘Genetic Diversity in European Populations: Evolutionary Evidence and Medical Implications’ in 2014; ‘Genes and the Environment in Obesity’ in 2013) are published every year. Renowned experts in the field are invited to contribute to these special issues.
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