等离子体团和人HSP70-HSP110的不同动力学特征突出了它们在伴侣辅助蛋白质折叠方面的差异。

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS
Aradhya Tripathi , Sara Del Galdo , Balasubramanian Chandramouli , Niti Kumar
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引用次数: 1

摘要

HSP70及其进化分化的共伴侣HSP110在蛋白质折叠级联中形成重要节点。与人类直系同源物相比,这些蛋白质如何保持疟原虫易于聚集的蛋白质组处于功能状态仍有待探索。在本研究中,我们通过多μs MD模拟(ATP状态)探讨了血浆HSP70和HSP110的构象动力学,并与它们各自的人类对应物进行了比较。模拟包括分别对寄生虫和人类直系同源物的HSP70和HSP110进行3.4和2.8μs的采样。我们对系统的动态行为进行了全面的描述,并引入了一个用于量化蛋白质刚性的参数。对于HSP70,种间比较显示,与Hs HSP70相比,保守NBD内IA和IB亚结构域的灵活性增强,结构域间连接子的溶剂可及性降低,Pf HSP70的SBDβ的动力学不同。在HSP110的情况下,在寄生虫和人类直系同源物之间观察到NBD、SBDβ和SBDα的动力学上的显著差异。尽管HSP70和HSP110是同一个超家族的成员,但我们在NBD的亚结构域接触、接头特性和它们的人类和寄生虫直系同源物的结构域间运动方面发现了特定的差异。我们的研究表明,在寄生虫和人类中,构象动力学的差异可能分别转化为HSP70-HSP110伴侣活性的物种特异性差异。Pf-HSP70-HSP110的动力学特征可能有助于维持寄生虫在宿主细胞内存活期间的蛋白稳定。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Distinct dynamical features of plasmodial and human HSP70-HSP110 highlight the divergence in their chaperone-assisted protein folding

Distinct dynamical features of plasmodial and human HSP70-HSP110 highlight the divergence in their chaperone-assisted protein folding

HSP70 and its evolutionarily diverged co-chaperone HSP110, forms an important node in protein folding cascade. How these proteins maintain the aggregation-prone proteome of malaria parasite in functional state remains underexplored, in contrast to its human orthologs. In this study, we have probed into conformational dynamics of plasmodial HSP70 and HSP110 through multiple μs MD-simulations (ATP-state) and compared with their respective human counterparts. Simulations covered sampling of 3.4 and 2.8 μs for HSP70 and HSP110, respectively, for parasite and human orthologs. We provide a comprehensive description of the dynamic behaviors that characterize the systems and also introduce a parameter for quantifying protein rigidity. For HSP70, the interspecies comparison reveals enhanced flexibility in IA and IB subdomain within the conserved NBD, lesser solvent accessibility of the interdomain linker and distinct dynamics of the SBDβ of Pf HSP70 in comparison to Hs HSP70. In the case of HSP110, notable contrast in the dynamics of NBD, SBDβ and SBDα was observed between parasite and human ortholog. Although HSP70 and HSP110 are members of the same superfamily, we identified specific differences in the subdomain contacts in NBD, linker properties and interdomain movements in their human and parasite orthologs. Our study suggests that differences in conformational dynamics may translate into species-specific differences in the chaperoning activities of HSP70-HSP110 in the parasite and human, respectively. Dynamical features of Pf HSP70-HSP110 may contribute to the maintenance of proteostasis in the parasite during its intracellular survival in the host.

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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