{"title":"AtCBL1的钙结合:结构和功能见解。","authors":"Alexandra Bork , Sander H.J. Smits , Lutz Schmitt","doi":"10.1016/j.bbapap.2023.140967","DOIUrl":null,"url":null,"abstract":"<div><p><span>CBL1 is an EF hand Ca</span><sup>2+</sup> binding protein from <em>A. thaliana</em> that is involved in the detection of cellular Ca<sup>2+</sup><span><span> signals and the downstream signal transmission by interaction with the protein kinase CIPK23. So far, the structure and </span>calcium ion<span><span> binding affinities of CBL1 remain elusive. In this study it was observed that CBL1 tends to form higher oligomeric states due to an intrinsic </span>hydrophobicity<span> and the presence of the detergent BriJ35 was required for the purification of monomeric and functional protein. Functional insights into the </span></span></span><em>in vitro</em> Ca<sup>2+</sup><span> binding capabilities of CBL1 were obtained by isothermal titration calorimetry (ITC) of the wildtype protein as well as single site EF hand mutants. Based on our results, a binding model of CBL1 for Ca</span><sup>2+</sup> <em>in vivo</em> is proposed. Additionally, upon both, ITC measurements and the analysis of an AlphaFold2 model of CBL1, we could gain first insights into the formation of the dimer interface. We could identify an area around EF hand 4 to be relevant for the structural and functional integrity of monomeric CBL1 and likely EF hand 1 to be involved in the dimer interface.</p></div>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2023-09-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Calcium binding of AtCBL1: Structural and functional insights\",\"authors\":\"Alexandra Bork , Sander H.J. Smits , Lutz Schmitt\",\"doi\":\"10.1016/j.bbapap.2023.140967\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p><span>CBL1 is an EF hand Ca</span><sup>2+</sup> binding protein from <em>A. thaliana</em> that is involved in the detection of cellular Ca<sup>2+</sup><span><span> signals and the downstream signal transmission by interaction with the protein kinase CIPK23. So far, the structure and </span>calcium ion<span><span> binding affinities of CBL1 remain elusive. In this study it was observed that CBL1 tends to form higher oligomeric states due to an intrinsic </span>hydrophobicity<span> and the presence of the detergent BriJ35 was required for the purification of monomeric and functional protein. Functional insights into the </span></span></span><em>in vitro</em> Ca<sup>2+</sup><span> binding capabilities of CBL1 were obtained by isothermal titration calorimetry (ITC) of the wildtype protein as well as single site EF hand mutants. Based on our results, a binding model of CBL1 for Ca</span><sup>2+</sup> <em>in vivo</em> is proposed. Additionally, upon both, ITC measurements and the analysis of an AlphaFold2 model of CBL1, we could gain first insights into the formation of the dimer interface. We could identify an area around EF hand 4 to be relevant for the structural and functional integrity of monomeric CBL1 and likely EF hand 1 to be involved in the dimer interface.</p></div>\",\"PeriodicalId\":2,\"journal\":{\"name\":\"ACS Applied Bio Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.6000,\"publicationDate\":\"2023-09-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Bio Materials\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S157096392300081X\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MATERIALS SCIENCE, BIOMATERIALS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Bio Materials","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S157096392300081X","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATERIALS SCIENCE, BIOMATERIALS","Score":null,"Total":0}
引用次数: 0
摘要
CBL1是来自拟南芥的EF手Ca2+结合蛋白,其通过与蛋白激酶CIPK23的相互作用参与细胞Ca2+信号的检测和下游信号传递。到目前为止,CBL1的结构和钙离子结合亲和力仍然难以捉摸。在该研究中观察到,由于固有的疏水性,CBL1倾向于形成更高的低聚态,并且纯化单体和功能蛋白需要洗涤剂BriJ35的存在。通过野生型蛋白质和单位点EF手突变体的等温滴定量热法(ITC)获得了对CBL1体外Ca2+结合能力的功能见解。基于我们的结果,提出了CBL1在体内对Ca2+的结合模型。此外,通过ITC测量和对CBL1的AlphaFold2模型的分析,我们可以首次深入了解二聚体界面的形成。我们可以确定EF hand 4周围与单体CBL1的结构和功能完整性相关的区域,并且可能EF hand 1参与二聚体界面。
Calcium binding of AtCBL1: Structural and functional insights
CBL1 is an EF hand Ca2+ binding protein from A. thaliana that is involved in the detection of cellular Ca2+ signals and the downstream signal transmission by interaction with the protein kinase CIPK23. So far, the structure and calcium ion binding affinities of CBL1 remain elusive. In this study it was observed that CBL1 tends to form higher oligomeric states due to an intrinsic hydrophobicity and the presence of the detergent BriJ35 was required for the purification of monomeric and functional protein. Functional insights into the in vitro Ca2+ binding capabilities of CBL1 were obtained by isothermal titration calorimetry (ITC) of the wildtype protein as well as single site EF hand mutants. Based on our results, a binding model of CBL1 for Ca2+in vivo is proposed. Additionally, upon both, ITC measurements and the analysis of an AlphaFold2 model of CBL1, we could gain first insights into the formation of the dimer interface. We could identify an area around EF hand 4 to be relevant for the structural and functional integrity of monomeric CBL1 and likely EF hand 1 to be involved in the dimer interface.