雌性日本黑牛垂体前腺基因表达的年龄相关变化。

Dimas Arya Abdillah, Onalenna Kereilwe, Yoichi Mizukami, Kenji Watanabe, Hiroya Kadokawa
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摘要

垂体前叶(AP)腺的正常功能是必要的,然而,通过不明确的机制被衰老抑制。因此,我们通过转录组深度测序(RNA-seq)鉴定了日本黑小母牛(大约22个月大)与老牛(大约120个月大)AP腺体中的差异表达基因(DEGs),以表征潜在的重要途径。年轻和年老的AP腺体表达了20,171个注释基因。每百万次转录本中,年轻和年老AP腺中7个AP激素基因的总和分别约为41.6%和35.5%,年轻和年老AP腺的总和存在差异(P < 0.05)。此外,与年轻AP腺体相比,我们在老年AP腺体中发现了48个下调基因和218个上调基因(P < 0.01, fold change > 120%)。DEGs包括1个细胞因子(AIMP1)、3个生长因子(NRG2、PTN和TGFB1)、1个受体相关蛋白基因(AGTRAP)和10个受体基因,包括PRLHR和2个孤儿g蛋白偶联受体(GPR156和GPR176)。deg的meta分析显示“肽代谢过程”、“激素水平调节”和“肽激素加工”是富集的通路。此外,deg的Ingenuity Pathway分析揭示了(1)一个由24个基因(包括GPR156和PRLHR)组成的网络,命名为“神经疾病、机体损伤和异常、心理障碍”;(2)两个典型信号通路(P < 0.01),即“亨廷顿病信号通路”和“AMPK信号通路”。因此,本研究的发现揭示了相关的deg,同时确定了在雌性牛的AP腺体衰老过程中发生的重要途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Age-associated changes in gene expression in the anterior pituitary glands of female Japanese black cattle.

Proper functioning of the anterior pituitary (AP) gland is imperative, however, is suppressed by aging via unclear mechanisms. Therefore, we identified differentially expressed genes (DEGs) in the AP glands of Japanese Black young heifers (approximately 22 months old) compared to old cows (approximately 120 months old) via deep sequencing of the transcriptome (RNA-seq) to characterize potentially important pathways. The young and old AP glands expressed 20,171 annotated genes. Of the total transcripts per million, approximately 41.6% and 35.5% were the sum of seven AP hormone genes in young and old AP glands, respectively, with difference observed in the sum between the young and old AP glands (P < 0.05). Moreover, we identified 48 downregulated genes and 218 upregulated genes in old compared to young AP glands (P < 0.01, fold change > 120%). The DEGs included 1 cytokine (AIMP1), 3 growth factors (NRG2, PTN, and TGFB1), 1 receptor-associated protein gene (AGTRAP), and 10 receptor genes, including PRLHR and two orphan G-protein-coupled receptors (GPR156 and GPR176). Metascape analysis of the DEGs revealed "Peptide metabolic process," "Regulation of hormone levels," and "Peptide hormone processing" as enriched pathways. Furthermore, Ingenuity Pathway analysis of the DEGs revealed (1) a network of 24 genes (including GPR156 and PRLHR) named "Neurological disease, organismal injury and abnormalities, and psychological disorders", and (2) two canonical pathways (P < 0.01), namely "Huntington's disease signaling", and "AMPK signaling". Thus, the findings of the current study revealed relevant DEGs, while identifying important pathways that occur during aging in AP glands of female cattle.

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