预防和减轻由空气传播病原体引起的大流行病的综合模拟框架。

IF 2 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Christos Chondros, Stavros D Nikolopoulos, Iosif Polenakis
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引用次数: 1

摘要

本文构建了空气传播致病菌大流行防控综合模拟框架,包括空间模型、流动性模型和传播模型三个子模型,为评估不同对策对流行动力学的有效性创造了一个真实的模拟环境。空间模型将从谷歌地图获得的真实城市图像转换为无向加权图,这些图捕获了用于个人移动的街道的空间布局。流动性模型实现了一种基于随机代理的方法,通过使用随机过程,利用底层图的权重来部署最短路径算法,为在城市中移动的个人分配特定路线。传播模型实现了空气传播病原体的流行病学模型和物理物质(在我们的方法中,我们研究了SARS-CoV-2的传播参数)。在减少病原体传播方面,研究了一套对策的部署,其中,通过一系列重复的模拟实验,我们评估了每种对策在大流行预防中的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens.

An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens.

An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens.

An integrated simulation framework for the prevention and mitigation of pandemics caused by airborne pathogens.

In this work, we developed an integrated simulation framework for pandemic prevention and mitigation of pandemics caused by airborne pathogens, incorporating three sub-models, namely the spatial model, the mobility model, and the propagation model, to create a realistic simulation environment for the evaluation of the effectiveness of different countermeasures on the epidemic dynamics. The spatial model converts images of real cities obtained from Google Maps into undirected weighted graphs that capture the spatial arrangement of the streets utilized next for the mobility of individuals. The mobility model implements a stochastic agent-based approach, developed to assign specific routes to individuals moving in the city, through the use of stochastic processes, utilizing the weights of the underlying graph to deploy shortest path algorithms. The propagation model implements both the epidemiological model and the physical substance of the transmission of an airborne pathogen (in our approach, we investigate the transmission parameters of SARS-CoV-2). The deployment of a set of countermeasures was investigated in reducing the spread of the pathogen, where, through a series of repetitive simulation experiments, we evaluated the effectiveness of each countermeasure in pandemic prevention.

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来源期刊
CiteScore
5.40
自引率
4.30%
发文量
43
期刊介绍: NetMAHIB publishes original research articles and reviews reporting how graph theory, statistics, linear algebra and machine learning techniques can be effectively used for modelling and analysis in health informatics and bioinformatics. It aims at creating a synergy between these disciplines by providing a forum for disseminating the latest developments and research findings; hence, results can be shared with readers across institutions, governments, researchers, students, and the industry. The journal emphasizes fundamental contributions on new methodologies, discoveries and techniques that have general applicability and which form the basis for network based modelling, knowledge discovery, knowledge sharing and decision support to the benefit of patients, healthcare professionals and society in traditional and advanced emerging settings, including eHealth and mHealth .
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