Jennifer Schauer , Sören G. Gatermann, Jessica Eisfeld, Jörg Hans, Niels Pfennigwerth
{"title":"产oxa -181的铜绿假单胞菌在德国的检测","authors":"Jennifer Schauer , Sören G. Gatermann, Jessica Eisfeld, Jörg Hans, Niels Pfennigwerth","doi":"10.1016/j.ijmm.2022.151557","DOIUrl":null,"url":null,"abstract":"<div><h3>Objectives</h3><p>To report the detection of the class D carbapenemase OXA-181 in an MDR clinical <em>Pseudomonas aeruginosa</em> isolate in Germany.</p></div><div><h3>Methods</h3><p>Carbapenemase detection was performed by using several phenotypic tests such as the modified Hodge test, a combined disc test with boronic acid, EDTA or cloxacillin, a lysate-based inhibition assays and by PCR for common and rare carbapenemase genes. Antibiotic susceptibilities were determined by broth microdilution. The genetic environment of <em>bla</em><sub>OXA-181</sub> in the clinical <em>P. aeruginosa</em> isolate was characterised by Illumina and MinION sequencing.</p></div><div><h3>Results</h3><p>An multidrug-resistant <em>P. aeruginosa</em> was isolated from a tracheal swab in 2019 and was sent to the German National Reference Centre for multidrug-resistant Gram-negative bacteria for carbapenemase detection. Several phenotypic tests indicated the presence of a carbapenemase which was not inhibited by EDTA nor by boronic acid. PCRs for common and rare carbapenemase genes revealed the presence of a <em>bla</em><sub>OXA-181</sub> gene. WGS data confirmed that the gene was located on the chromosome as part of a Tn<em>2013</em> transposon. The genetic organisation of <em>bla</em><sub>OXA-181</sub> has already been described in a <em>P. aeruginosa</em> isolate from England, but both isolates differed significantly in their sequence types (ST111/ST235). Analysis of the genetic environment of the <em>bla</em><sub>OXA-181</sub> gene also revealed high homology to a plasmid from a <em>Klebsiella pneumoniae</em> isolate.</p></div><div><h3>Conclusions</h3><p>To our knowledge, this is the first report of <em>bla</em><sub>OXA-181</sub> in a clinical <em>P. aeruginosa</em> isolate in Germany which emphasises the ongoing spread of yet unusual carbapenemases among different Gram-negative species and therefore complicating their detection in routine laboratories.</p></div>","PeriodicalId":50312,"journal":{"name":"International Journal of Medical Microbiology","volume":"312 5","pages":"Article 151557"},"PeriodicalIF":4.5000,"publicationDate":"2022-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1438422122000108/pdfft?md5=ece77fe4623d6788d66c9eafd6b60c25&pid=1-s2.0-S1438422122000108-main.pdf","citationCount":"2","resultStr":"{\"title\":\"Detection of OXA-181-producing Pseudomonas aeruginosa in Germany\",\"authors\":\"Jennifer Schauer , Sören G. Gatermann, Jessica Eisfeld, Jörg Hans, Niels Pfennigwerth\",\"doi\":\"10.1016/j.ijmm.2022.151557\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Objectives</h3><p>To report the detection of the class D carbapenemase OXA-181 in an MDR clinical <em>Pseudomonas aeruginosa</em> isolate in Germany.</p></div><div><h3>Methods</h3><p>Carbapenemase detection was performed by using several phenotypic tests such as the modified Hodge test, a combined disc test with boronic acid, EDTA or cloxacillin, a lysate-based inhibition assays and by PCR for common and rare carbapenemase genes. Antibiotic susceptibilities were determined by broth microdilution. The genetic environment of <em>bla</em><sub>OXA-181</sub> in the clinical <em>P. aeruginosa</em> isolate was characterised by Illumina and MinION sequencing.</p></div><div><h3>Results</h3><p>An multidrug-resistant <em>P. aeruginosa</em> was isolated from a tracheal swab in 2019 and was sent to the German National Reference Centre for multidrug-resistant Gram-negative bacteria for carbapenemase detection. Several phenotypic tests indicated the presence of a carbapenemase which was not inhibited by EDTA nor by boronic acid. PCRs for common and rare carbapenemase genes revealed the presence of a <em>bla</em><sub>OXA-181</sub> gene. WGS data confirmed that the gene was located on the chromosome as part of a Tn<em>2013</em> transposon. The genetic organisation of <em>bla</em><sub>OXA-181</sub> has already been described in a <em>P. aeruginosa</em> isolate from England, but both isolates differed significantly in their sequence types (ST111/ST235). Analysis of the genetic environment of the <em>bla</em><sub>OXA-181</sub> gene also revealed high homology to a plasmid from a <em>Klebsiella pneumoniae</em> isolate.</p></div><div><h3>Conclusions</h3><p>To our knowledge, this is the first report of <em>bla</em><sub>OXA-181</sub> in a clinical <em>P. aeruginosa</em> isolate in Germany which emphasises the ongoing spread of yet unusual carbapenemases among different Gram-negative species and therefore complicating their detection in routine laboratories.</p></div>\",\"PeriodicalId\":50312,\"journal\":{\"name\":\"International Journal of Medical Microbiology\",\"volume\":\"312 5\",\"pages\":\"Article 151557\"},\"PeriodicalIF\":4.5000,\"publicationDate\":\"2022-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S1438422122000108/pdfft?md5=ece77fe4623d6788d66c9eafd6b60c25&pid=1-s2.0-S1438422122000108-main.pdf\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Medical Microbiology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1438422122000108\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Medical Microbiology","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1438422122000108","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Detection of OXA-181-producing Pseudomonas aeruginosa in Germany
Objectives
To report the detection of the class D carbapenemase OXA-181 in an MDR clinical Pseudomonas aeruginosa isolate in Germany.
Methods
Carbapenemase detection was performed by using several phenotypic tests such as the modified Hodge test, a combined disc test with boronic acid, EDTA or cloxacillin, a lysate-based inhibition assays and by PCR for common and rare carbapenemase genes. Antibiotic susceptibilities were determined by broth microdilution. The genetic environment of blaOXA-181 in the clinical P. aeruginosa isolate was characterised by Illumina and MinION sequencing.
Results
An multidrug-resistant P. aeruginosa was isolated from a tracheal swab in 2019 and was sent to the German National Reference Centre for multidrug-resistant Gram-negative bacteria for carbapenemase detection. Several phenotypic tests indicated the presence of a carbapenemase which was not inhibited by EDTA nor by boronic acid. PCRs for common and rare carbapenemase genes revealed the presence of a blaOXA-181 gene. WGS data confirmed that the gene was located on the chromosome as part of a Tn2013 transposon. The genetic organisation of blaOXA-181 has already been described in a P. aeruginosa isolate from England, but both isolates differed significantly in their sequence types (ST111/ST235). Analysis of the genetic environment of the blaOXA-181 gene also revealed high homology to a plasmid from a Klebsiella pneumoniae isolate.
Conclusions
To our knowledge, this is the first report of blaOXA-181 in a clinical P. aeruginosa isolate in Germany which emphasises the ongoing spread of yet unusual carbapenemases among different Gram-negative species and therefore complicating their detection in routine laboratories.
期刊介绍:
Pathogen genome sequencing projects have provided a wealth of data that need to be set in context to pathogenicity and the outcome of infections. In addition, the interplay between a pathogen and its host cell has become increasingly important to understand and interfere with diseases caused by microbial pathogens. IJMM meets these needs by focussing on genome and proteome analyses, studies dealing with the molecular mechanisms of pathogenicity and the evolution of pathogenic agents, the interactions between pathogens and host cells ("cellular microbiology"), and molecular epidemiology. To help the reader keeping up with the rapidly evolving new findings in the field of medical microbiology, IJMM publishes original articles, case studies and topical, state-of-the-art mini-reviews in a well balanced fashion. All articles are strictly peer-reviewed. Important topics are reinforced by 2 special issues per year dedicated to a particular theme. Finally, at irregular intervals, current opinions on recent or future developments in medical microbiology are presented in an editorial section.