在单分子水平上探索原子核动态结构的视角。

Thomas Dange, Aviva Joseph, David Grünwald
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引用次数: 9

摘要

细胞生命可以被描述为一个高度复杂的相互作用的分子网络的动态平衡。由于这个原因,“仅仅”知道细胞过程中参与者的身份已经不够了,还必须解决诸如地点、时间和持续时间等问题,以理解正在研究的机制。此外,集合测量可能不能充分描述分子迁移、时空分辨率、动力学参数和地理制图的单个步骤。为了增进我们对活细胞的理解,研究各个步骤究竟发生在哪里是至关重要的。细胞核中有许多高度复杂的多阶过程,如复制、转录、剪接等,提供了一个复杂的、异质的景观。利用荧光相关光谱(FCS)对其动力学进行了更详细的研究。单分子追踪虽然在细胞生物学中仍处于起步阶段,但正在成为一种越来越有吸引力的方法来推断这种细胞器的关键元素。在这里,我们讨论了在细胞核中跟踪单个rna和蛋白质的潜力。它们的动态、定位和相互作用速率对我们理解细胞生命至关重要。为了证明这一点,我们提供了HIV生命周期的回顾,这是核和细胞质功能的极其优雅的平衡,并提供了一个机会来研究细胞核结构内深度集成的机制。总之,我们的目标是基于单分子和FCS数据提供一个特定的、动态的核细胞生命视图,并对未来进行展望。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A perspective of the dynamic structure of the nucleus explored at the single-molecule level.

A perspective of the dynamic structure of the nucleus explored at the single-molecule level.

A perspective of the dynamic structure of the nucleus explored at the single-molecule level.

A perspective of the dynamic structure of the nucleus explored at the single-molecule level.

Cellular life can be described as a dynamic equilibrium of a highly complex network of interacting molecules. For this reason, it is no longer sufficient to "only" know the identity of the participants in a cellular process, but questions such as where, when, and for how long also have to be addressed to understand the mechanism being investigated. Additionally, ensemble measurements may not sufficiently describe individual steps of molecular mobility, spatial-temporal resolution, kinetic parameters, and geographical mapping. It is vital to investigate where individual steps exactly occur to enhance our understanding of the living cell. The nucleus, home too many highly complex multi-order processes, such as replication, transcription, splicing, etc., provides a complicated, heterogeneous landscape. Its dynamics were studied to a new level of detail by fluorescence correlation spectroscopy (FCS). Single-molecule tracking, while still in its infancy in cell biology, is becoming a more and more attractive method to deduce key elements of this organelle. Here we discuss the potential of tracking single RNAs and proteins in the nucleus. Their dynamics, localization, and interaction rates will be vital to our understanding of cellular life. To demonstrate this, we provide a review of the HIV life cycle, which is an extremely elegant balance of nuclear and cytoplasmic functions and provides an opportunity to study mechanisms deeply integrated within the structure of the nucleus. In summary, we aim to present a specific, dynamic view of nuclear cellular life based on single molecule and FCS data and provide a prospective for the future.

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