通过分子对接研究小花草植物成分对2型糖尿病的潜在葡萄糖激酶激活作用。

In Silico Pharmacology Pub Date : 2021-12-02 eCollection Date: 2022-01-01 DOI:10.1007/s40203-021-00116-8
Altaf Khan, Aziz Unnisa, Mo Sohel, Mohan Date, Nayan Panpaliya, Shweta G Saboo, Falak Siddiqui, Sharuk Khan
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引用次数: 19

摘要

葡萄糖激酶(GK)是一种参与葡萄糖合成葡萄糖-6磷酸的酶,在葡萄糖传感中起着至关重要的作用。因此,诱导GK活化的药物可用于治疗T2DM。本研究通过分子对接的方法,研究了利托尔草(Enicostemma littorale)植物成分GK活化电位。所有植物成分均通过Lipinski规则5、Veber规则和ADMET特性进行筛选。从这些初步筛选中,只有芹菜素、阿魏酸、根宽素、对香豆酸、原儿茶酸、丁香酸和香草酸被选中进行分子对接研究。天然配体在酶的变构位点的结合自由能和结合方式被认为是其他分子验证的参考。天然配体的结合自由能为- 7.2 kcal/mol;它与thrr -228、LYS-169、ASP-78和GLY-81形成4个氢键。基于这些发现,植物成分的相互作用是合理的。芹菜素、根黄素和獐牙菜黄素的结合自由能分别为- 8.7、- 7.5和- 8.3 kcal/mol,表明其酶活性优于天然配体。獐牙菜黄素与变构氨基酸残基形成了08个氢键,证实了这些植物成分具有良好的酶活化作用。我们的结论是,如果我们能够从这种植物中分离和消耗确切的活性植物成分(GK激活剂),我们可以有效地使用它们来治疗2型糖尿病。更多的GK活化剂可以被认为是一种天然的铅基团。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Investigation of phytoconstituents of <i>Enicostemma littorale</i> as potential glucokinase activators through molecular docking for the treatment of type 2 diabetes mellitus.

Investigation of phytoconstituents of Enicostemma littorale as potential glucokinase activators through molecular docking for the treatment of type 2 diabetes mellitus.

Glucokinase (GK) is an enzyme involved in synthesising glucose into glucose-6 phosphate and serves a crucial function in glucose sensing. Therefore, agents that induce GK activation could be used to treat T2DM. The present work has been carried out to investigate the GK activation potential of phytoconstituents of Enicostemma littorale through molecular docking. All the phytoconstituents have been screened through the Lipinski rule of 5, Veber's rule, and ADMET properties. From these initial screening, only Apigenin, Ferulic acid, Genkwanin, p-coumaric acid, Protocatechuic acid, Syringic acid, and Vanillic acid have been selected to perform molecular docking studies. The binding free energy and binding mode of the native ligand in the allosteric site of the enzyme have been considered the reference for the other molecules' validation. The native ligand has exhibited - 7.2 kcal/mol binding free energy, whereas; it has formed four hydrogen bonds with THR-228, LYS-169, ASP-78, and GLY-81. Based on these findings, the interactions of phytoconstituents have been justified. Apigenin, genkwanin, and swertiamarin exhibited - 8.7, - 7.5, and - 8.3 kcal/mol binding free energy, respectively, which indicates better enzyme activation than the native ligand. Swertiamarin has formed 08 hydrogen bonds with allosteric amino acid residues, which confirms the excellent enzyme activation by these phytoconstituents. We concluded that if we can isolate and consume the exact active phytoconstituents (GK activators) from this plant, we can use them effectively to treat T2DM. More GK activators can be developed by considering them as a natural lead moiety.

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