Zainab E Elsababty, Samir H Abdel-Aziz, Atef M Ibrahim, Adel A Guirgis, Ghada E Dawwam
{"title":"地衣芽孢杆菌Z9纤维素酶的纯化、生化特性及分子克隆","authors":"Zainab E Elsababty, Samir H Abdel-Aziz, Atef M Ibrahim, Adel A Guirgis, Ghada E Dawwam","doi":"10.1186/s43141-022-00317-4","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Cellulose is the most prevalent biomass and renewable energy source in nature. The hydrolysis of cellulosic biomass to glucose units is essential for the economic exploitation of this natural resource. Cellulase enzyme, which is largely generated by bacteria and fungus, is commonly used to degrade cellulose. Cellulases are used in a variety of industries, including bioethanol manufacturing, textiles, detergents, drugs, food, and paper. As part of our quest to find an efficient biocatalyst for the hydrolysis of cellulosic biomass, we describe the amplification, cloning, and sequencing of cellulase (cel9z) from Bacillus licheniformis strain Z9, as well as the characterization of the resulting enzyme.</p><p><strong>Results: </strong>Cellulase was partially purified from B. licheniformis strain Z9 using (NH<sub>4</sub>)<sub>2</sub>SO<sub>4</sub> precipitation and Sephadex G-100 gel column chromatography with 356.5 U/mg specific activity, 2.1-purification fold, and 3.07 % yield. The nucleotide sequence of the cellulase gene was deposited to the GenBank, B. licheniformis strain Z9 cellulase (cel9z) gene, under accession number MK814929. This corresponds to 1453 nucleotides gene and encodes for a protein composed of 484 amino acids. Comparison of deduced amino acids sequence to other related cellulases showed that the enzyme cel9z can be classified as a glycoside hydrolase family 9. SDS-PAGE analysis of the purified enzyme revealed that the molecular mass was 54.5 kDa. The optimal enzyme activity was observed at pH 7.4 and 30 °C. The enzyme was found to be strongly inhibited by Mg<sup>2+</sup> and Na<sup>+</sup>, whereas strongly activated by Fe<sup>3+</sup>, Cu<sup>2+</sup>, and Ca<sup>2+</sup>.</p><p><strong>Conclusions: </strong>B. licheniformis strain Z9 and its cellulase gene can be further utilized for recombinant production of cellulases for industrial application.</p>","PeriodicalId":74026,"journal":{"name":"Journal, genetic engineering & biotechnology","volume":" ","pages":"34"},"PeriodicalIF":3.6000,"publicationDate":"2022-02-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8864052/pdf/","citationCount":"5","resultStr":"{\"title\":\"Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil.\",\"authors\":\"Zainab E Elsababty, Samir H Abdel-Aziz, Atef M Ibrahim, Adel A Guirgis, Ghada E Dawwam\",\"doi\":\"10.1186/s43141-022-00317-4\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Cellulose is the most prevalent biomass and renewable energy source in nature. The hydrolysis of cellulosic biomass to glucose units is essential for the economic exploitation of this natural resource. Cellulase enzyme, which is largely generated by bacteria and fungus, is commonly used to degrade cellulose. Cellulases are used in a variety of industries, including bioethanol manufacturing, textiles, detergents, drugs, food, and paper. As part of our quest to find an efficient biocatalyst for the hydrolysis of cellulosic biomass, we describe the amplification, cloning, and sequencing of cellulase (cel9z) from Bacillus licheniformis strain Z9, as well as the characterization of the resulting enzyme.</p><p><strong>Results: </strong>Cellulase was partially purified from B. licheniformis strain Z9 using (NH<sub>4</sub>)<sub>2</sub>SO<sub>4</sub> precipitation and Sephadex G-100 gel column chromatography with 356.5 U/mg specific activity, 2.1-purification fold, and 3.07 % yield. The nucleotide sequence of the cellulase gene was deposited to the GenBank, B. licheniformis strain Z9 cellulase (cel9z) gene, under accession number MK814929. This corresponds to 1453 nucleotides gene and encodes for a protein composed of 484 amino acids. Comparison of deduced amino acids sequence to other related cellulases showed that the enzyme cel9z can be classified as a glycoside hydrolase family 9. SDS-PAGE analysis of the purified enzyme revealed that the molecular mass was 54.5 kDa. The optimal enzyme activity was observed at pH 7.4 and 30 °C. 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引用次数: 5
摘要
背景:纤维素是自然界中最普遍的生物质和可再生能源。纤维素生物质水解为葡萄糖单位对这种自然资源的经济开发是必不可少的。纤维素酶主要由细菌和真菌产生,通常用于降解纤维素。纤维素酶用于各种行业,包括生物乙醇制造、纺织品、洗涤剂、药品、食品和造纸。作为我们寻找纤维素生物质水解的高效生物催化剂的一部分,我们描述了从地衣芽孢杆菌菌株Z9中扩增,克隆和测序纤维素酶(cel9z),以及所得酶的表征。结果:采用(NH4)2SO4沉淀法和Sephadex G-100凝胶柱层析法从地衣芽胞杆菌Z9中分离得到部分纤维素酶,比活性356.5 U/mg,纯化倍数2.1倍,产率3.07%。纤维素酶基因的核苷酸序列存入GenBank, B. licheniformis菌株Z9纤维素酶(cel9z)基因,登录号为MK814929。该基因对应1453个核苷酸,编码由484个氨基酸组成的蛋白质。与其他相关纤维素酶的氨基酸序列比较表明,cel9z酶可归类为糖苷水解酶家族9。经SDS-PAGE分析,酶的分子量为54.5 kDa。在pH 7.4和30°C条件下酶活性最佳。该酶被Mg2+和Na+强烈抑制,而被Fe3+、Cu2+和Ca2+强烈激活。结论:地衣芽胞杆菌菌株Z9及其纤维素酶基因可进一步用于纤维素酶的重组生产。
Purification, biochemical characterization, and molecular cloning of cellulase from Bacillus licheniformis strain Z9 isolated from soil.
Background: Cellulose is the most prevalent biomass and renewable energy source in nature. The hydrolysis of cellulosic biomass to glucose units is essential for the economic exploitation of this natural resource. Cellulase enzyme, which is largely generated by bacteria and fungus, is commonly used to degrade cellulose. Cellulases are used in a variety of industries, including bioethanol manufacturing, textiles, detergents, drugs, food, and paper. As part of our quest to find an efficient biocatalyst for the hydrolysis of cellulosic biomass, we describe the amplification, cloning, and sequencing of cellulase (cel9z) from Bacillus licheniformis strain Z9, as well as the characterization of the resulting enzyme.
Results: Cellulase was partially purified from B. licheniformis strain Z9 using (NH4)2SO4 precipitation and Sephadex G-100 gel column chromatography with 356.5 U/mg specific activity, 2.1-purification fold, and 3.07 % yield. The nucleotide sequence of the cellulase gene was deposited to the GenBank, B. licheniformis strain Z9 cellulase (cel9z) gene, under accession number MK814929. This corresponds to 1453 nucleotides gene and encodes for a protein composed of 484 amino acids. Comparison of deduced amino acids sequence to other related cellulases showed that the enzyme cel9z can be classified as a glycoside hydrolase family 9. SDS-PAGE analysis of the purified enzyme revealed that the molecular mass was 54.5 kDa. The optimal enzyme activity was observed at pH 7.4 and 30 °C. The enzyme was found to be strongly inhibited by Mg2+ and Na+, whereas strongly activated by Fe3+, Cu2+, and Ca2+.
Conclusions: B. licheniformis strain Z9 and its cellulase gene can be further utilized for recombinant production of cellulases for industrial application.