非洲蜜蜂(膜翅目:蜜蜂科)的高分辨率(mtDNA)熔化分析。

IF 1.3 4区 生物学 Q4 GENETICS & HEREDITY
Genetica Pub Date : 2021-12-01 Epub Date: 2021-10-26 DOI:10.1007/s10709-021-00139-1
Leonardo P Porrini, Constanza Brasesco, Matias Maggi, Martín J Eguaras, Silvina Quintana
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引用次数: 0

摘要

通过对蜜蜂mtDNA变异的分析,可以用不同的分子方法区分亚种和进化谱系;从RFLP,到PCR-RFLP和直接测序。同样,几何形态计量学(GM)已被用于区分非洲化蜜蜂,与使用分子信息的研究高度一致。高分辨率融合分析(HRM)允许人们通过比较实时PCR (qPCR)产生的短扩增子中的DNA熔化曲线来快速识别序列多态性。这项工作的目的是实施HRM技术在阿根廷蜜蜂殖民地非洲化的诊断,使用转基因作为验证方法。从60个蜜蜂菌落中提取DNA进行有丝分裂型鉴定。通过线粒体细胞色素b基因(cytb)两个区域(485 bp/385 bp)的qpcr,对样品进行HRM分析。然后对该技术进行优化,扩增更小的PCR产物(207 bp),用于菌落非洲化的HRM诊断。在分析的60个群体样本中,41个被归类为欧洲起源的殖民地,而19个被归类为非洲起源。所有HRM分类的样本均被GM正确验证,表明该技术可用于快速鉴定蜜蜂样本中的非洲有丝分裂型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
High-resolution (mtDNA) melting analysis for simple and efficient characterization of Africanized honey bee Apis mellifera (Hymenoptera:Apidae).

Analysis of the mtDNA variation in Apis mellifera L. has allowed distinguishing subspecies and evolutionary lineages by means of different molecular methods; from RFLP, to PCR-RFLP and direct sequencing. Likewise, geometric morphometrics (GM) has been used to distinguish Africanized honey bees with a high degree of consistency with studies using molecular information. High-resolution fusion analysis (HRM) allows one to quickly identify sequence polymorphisms by comparing DNA melting curves in short amplicons generated by real-time PCR (qPCR). The objective of this work was to implement the HRM technique in the diagnosis of Africanization of colonies of A. mellifera from Argentina, using GM as a validation method. DNA was extracted from 60 A. mellifera colonies for mitotype identification. Samples were initially analyzed by HRM, through qPCRs of two regions (485 bp/385 bp) of the mitochondrial cytochrome b gene (cytb). This technique was then optimizing to amplify a smaller PCR product (207 bp) for the HRM diagnosis for the Africanization of colonies. Of the 60 colony samples analyzed, 41 were classified as colonies of European origin whereas 19 revealed African origin. All the samples classified by HRM were correctly validated by GM, demonstrating that this technique could be implemented for a rapid identification of African mitotypes in Apis mellifera samples.

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来源期刊
Genetica
Genetica 生物-遗传学
CiteScore
2.70
自引率
0.00%
发文量
32
审稿时长
>12 weeks
期刊介绍: Genetica publishes papers dealing with genetics, genomics, and evolution. Our journal covers novel advances in the fields of genomics, conservation genetics, genotype-phenotype interactions, evo-devo, population and quantitative genetics, and biodiversity. Genetica publishes original research articles addressing novel conceptual, experimental, and theoretical issues in these areas, whatever the taxon considered. Biomedical papers and papers on breeding animal and plant genetics are not within the scope of Genetica, unless framed in an evolutionary context. Recent advances in genetics, genomics and evolution are also published in thematic issues and synthesis papers published by experts in the field.
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