基于深度学习算法的胃炎组织病理学诊断系统。

Wei Ba, Shu-Hao Wang, Can-Cheng Liu, Yue-Feng Wang, Huai-Yin Shi, Zhi-Gang Song
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引用次数: 1

摘要

目的建立一种用于慢性胃炎病理分类的深度学习算法,并利用全切片图像(WSIs)评价其表现。方法回顾性收集解放军总医院1250例胃活检标本,其中胃炎1128例,正常粘膜122例。基于DeepLab v3 (ResNet-50)架构的深度学习算法分别使用1008个wsi和100个wsi进行训练和验证。在142个wsi的独立测试集上测试算法的诊断性能,以病理学家的共识诊断为金标准。结果在测试集中分别生成慢性浅表性胃炎(CSuG)、慢性活动性胃炎(CAcG)和慢性萎缩性胃炎(CAtG)的受试者工作特征(ROC)曲线。算法对CSuG、CAcG和CAtG的ROC曲线下面积(aus)分别为0.882、0.905和0.910。深度学习算法对CSuG、CAcG和CAtG分类的敏感性和特异性分别为0.790和1.000(准确率0.880)、0.985和0.829(准确率0.901)、0.952和0.992(准确率0.986)。三种不同类型胃炎的总体预测准确率为0.867。通过在WSI中标记算法识别的可疑区域,可以生成更透明和可解释的诊断。结论深度学习算法对WSIs进行慢性胃炎分类具有较高的准确率。通过对胃炎不同部位的预突出,可作为辅助诊断工具,提高病理医师的工作效率。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Histopathological Diagnosis System for Gastritis Using Deep Learning Algorithm.

Objective To develope a deep learning algorithm for pathological classification of chronic gastritis and assess its performance using whole-slide images (WSIs). Methods We retrospectively collected 1,250 gastric biopsy specimens (1,128 gastritis, 122 normal mucosa) from PLA General Hospital. The deep learning algorithm based on DeepLab v3 (ResNet-50) architecture was trained and validated using 1,008 WSIs and 100 WSIs, respectively. The diagnostic performance of the algorithm was tested on an independent test set of 142 WSIs, with the pathologists' consensus diagnosis as the gold standard. Results The receiver operating characteristic (ROC) curves were generated for chronic superficial gastritis (CSuG), chronic active gastritis (CAcG), and chronic atrophic gastritis (CAtG) in the test set, respectively.The areas under the ROC curves (AUCs) of the algorithm for CSuG, CAcG, and CAtG were 0.882, 0.905 and 0.910, respectively. The sensitivity and specificity of the deep learning algorithm for the classification of CSuG, CAcG, and CAtG were 0.790 and 1.000 (accuracy 0.880), 0.985 and 0.829 (accuracy 0.901), 0.952 and 0.992 (accuracy 0.986), respectively. The overall predicted accuracy for three different types of gastritis was 0.867. By flagging the suspicious regions identified by the algorithm in WSI, a more transparent and interpretable diagnosis can be generated. Conclusion The deep learning algorithm achieved high accuracy for chronic gastritis classification using WSIs. By pre-highlighting the different gastritis regions, it might be used as an auxiliary diagnostic tool to improve the work efficiency of pathologists.

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