Trinidad Arcos-López, Nils Schuth, Liliana Quintanar
{"title":"1型蓝铜位点:从电子转移到生物功能。","authors":"Trinidad Arcos-López, Nils Schuth, Liliana Quintanar","doi":"10.1515/9783110589757-009","DOIUrl":null,"url":null,"abstract":"<p><p>Cupredoxins host in their scaffold one of the most studied and interesting metal sites in biology: the type 1 (T1) or blue Cu center. Blue Cu proteins have evolved to play key roles in biological electron transfer and have the ability to react with a wide variety of redox partners. The inner coordination sphere of T1 Cu sites conserves two histidines and one cysteine with a short Cu-S(Cys) bond as ligands in a trigonal arrangement, with a variable axial ligand that modulates the electronic structure and reactivity. The structural, electronic and geometric features of T1 Cu centers provide the basis for a site that can be optimized by the protein structure for each biological function. This chapter highlights the properties that make this unique Cu center in biology an efficient and tunable electron transfer site. The contributions of the first coordination shell and the high covalency of the Cu-S(Cys) bond in the T1 Cu site to its distinctive geometric and spectroscopic features are discussed, as well as the role of the protein scaffold in imposing an 'entatic' state with a distorted tetrahedral geometry that minimizes geometric changes upon redox cycling. The analysis of naturally occurring perturbed blue Cu sites provides further insights into how the protein scaffold can tune the properties of the T1 Cu site. Blue Cu sites display a wide range of reduction potentials, as these are tuned to be consistent with their physiologically relevant electron donors and acceptors. The different properties of the protein matrix that play important roles in finetuning the reduction potential of T1 Cu sites are also discussed, including the nature of the axial ligand and outer coordination sphere effects. These concepts are further illustrated by the discussion of examples of biosynthetic blue Cu proteins. Finally, the different features of the T1 Cu site that make it an optimal site for electron transfer (ET) are discussed, in terms of Markus theory for intra- and inter-molecular ET. The active site in multicopper oxidases is used as an example to illustrate the contributions of the anisotropic covalency of the blue Cu site to an efficient ET, while the diverse reactivity of the T1 Cu sites in these enzymes is discussed to dissect the different properties provided by the protein that help tune these unique sites for biological ET.</p>","PeriodicalId":18698,"journal":{"name":"Metal ions in life sciences","volume":"20 ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2020-03-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1515/9783110589757-009","citationCount":"2","resultStr":"{\"title\":\"The Type 1 Blue Copper Site: From Electron Transfer to Biological Function.\",\"authors\":\"Trinidad Arcos-López, Nils Schuth, Liliana Quintanar\",\"doi\":\"10.1515/9783110589757-009\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Cupredoxins host in their scaffold one of the most studied and interesting metal sites in biology: the type 1 (T1) or blue Cu center. Blue Cu proteins have evolved to play key roles in biological electron transfer and have the ability to react with a wide variety of redox partners. The inner coordination sphere of T1 Cu sites conserves two histidines and one cysteine with a short Cu-S(Cys) bond as ligands in a trigonal arrangement, with a variable axial ligand that modulates the electronic structure and reactivity. The structural, electronic and geometric features of T1 Cu centers provide the basis for a site that can be optimized by the protein structure for each biological function. This chapter highlights the properties that make this unique Cu center in biology an efficient and tunable electron transfer site. The contributions of the first coordination shell and the high covalency of the Cu-S(Cys) bond in the T1 Cu site to its distinctive geometric and spectroscopic features are discussed, as well as the role of the protein scaffold in imposing an 'entatic' state with a distorted tetrahedral geometry that minimizes geometric changes upon redox cycling. The analysis of naturally occurring perturbed blue Cu sites provides further insights into how the protein scaffold can tune the properties of the T1 Cu site. Blue Cu sites display a wide range of reduction potentials, as these are tuned to be consistent with their physiologically relevant electron donors and acceptors. The different properties of the protein matrix that play important roles in finetuning the reduction potential of T1 Cu sites are also discussed, including the nature of the axial ligand and outer coordination sphere effects. These concepts are further illustrated by the discussion of examples of biosynthetic blue Cu proteins. Finally, the different features of the T1 Cu site that make it an optimal site for electron transfer (ET) are discussed, in terms of Markus theory for intra- and inter-molecular ET. 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引用次数: 2
摘要
铜氧毒素在其支架中含有生物学中研究最多和最有趣的金属位点之一:1型(T1)或蓝色铜中心。蓝铜蛋白已经进化到在生物电子转移中发挥关键作用,并具有与各种氧化还原伙伴反应的能力。T1 Cu位点的内配位球保留了两个组氨酸和一个具有短Cu- s (Cys)键的半胱氨酸作为配体以三角形排列,具有可变的轴向配体调节电子结构和反应性。T1 Cu中心的结构、电子和几何特征为每个生物功能的蛋白质结构优化位点提供了基础。本章重点介绍了使这个独特的Cu中心在生物学中成为一个高效和可调的电子转移位点的特性。讨论了第一配位壳和Cu- s (Cys)键在T1 Cu位点上的高共价对其独特的几何和光谱特征的贡献,以及蛋白质支架在施加具有扭曲四面体几何结构的“内嵌”状态中的作用,该结构可以最大限度地减少氧化还原循环时的几何变化。对自然发生的受干扰的蓝色Cu位点的分析为蛋白质支架如何调节T1 Cu位点的性质提供了进一步的见解。蓝铜位点显示出广泛的还原电位,因为这些被调整为与其生理相关的电子给体和受体一致。本文还讨论了在调节T1 Cu位点还原电位中起重要作用的蛋白质基质的不同性质,包括轴向配体的性质和外配位球效应。通过对生物合成蓝铜蛋白实例的讨论,进一步说明了这些概念。最后,根据分子内和分子间电子转移的Markus理论,讨论了T1 Cu位点的不同特征,使其成为电子转移(ET)的最佳位点。以多铜氧化酶中的活性位点为例,说明了蓝铜位点的各向异性共价对高效ET的贡献。同时讨论了这些酶中T1 Cu位点的不同反应性,以剖析蛋白质提供的不同特性,这些特性有助于调节这些独特的生物ET位点。
The Type 1 Blue Copper Site: From Electron Transfer to Biological Function.
Cupredoxins host in their scaffold one of the most studied and interesting metal sites in biology: the type 1 (T1) or blue Cu center. Blue Cu proteins have evolved to play key roles in biological electron transfer and have the ability to react with a wide variety of redox partners. The inner coordination sphere of T1 Cu sites conserves two histidines and one cysteine with a short Cu-S(Cys) bond as ligands in a trigonal arrangement, with a variable axial ligand that modulates the electronic structure and reactivity. The structural, electronic and geometric features of T1 Cu centers provide the basis for a site that can be optimized by the protein structure for each biological function. This chapter highlights the properties that make this unique Cu center in biology an efficient and tunable electron transfer site. The contributions of the first coordination shell and the high covalency of the Cu-S(Cys) bond in the T1 Cu site to its distinctive geometric and spectroscopic features are discussed, as well as the role of the protein scaffold in imposing an 'entatic' state with a distorted tetrahedral geometry that minimizes geometric changes upon redox cycling. The analysis of naturally occurring perturbed blue Cu sites provides further insights into how the protein scaffold can tune the properties of the T1 Cu site. Blue Cu sites display a wide range of reduction potentials, as these are tuned to be consistent with their physiologically relevant electron donors and acceptors. The different properties of the protein matrix that play important roles in finetuning the reduction potential of T1 Cu sites are also discussed, including the nature of the axial ligand and outer coordination sphere effects. These concepts are further illustrated by the discussion of examples of biosynthetic blue Cu proteins. Finally, the different features of the T1 Cu site that make it an optimal site for electron transfer (ET) are discussed, in terms of Markus theory for intra- and inter-molecular ET. The active site in multicopper oxidases is used as an example to illustrate the contributions of the anisotropic covalency of the blue Cu site to an efficient ET, while the diverse reactivity of the T1 Cu sites in these enzymes is discussed to dissect the different properties provided by the protein that help tune these unique sites for biological ET.