多药耐药肠炎沙门氏菌亚群全基因组和质粒序列。从德国养牛场分离出的巴拿马血清型肠球菌。

Journal of Genomics Pub Date : 2020-06-29 eCollection Date: 2020-01-01 DOI:10.7150/jgen.48656

Anne Busch, Helmut Hotzel, Ulrich Methner

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引用次数: 1

摘要

我们描述了一种罕见的分离的肠沙门氏菌亚种。具有广谱β-内酰胺酶(ESBL)谱的巴拿马肠菌血清型牛来自德国养牛场。采用两种新一代测序方法，我们获得了基因组序列和质粒;组装肠沙门氏菌亚种基因组序列草图。巴拿马肠血清型分离株18PM0209。采用生物信息学方法对耐药基因、毒力相关基因和质粒进行分析。在养牛场发生的耐多药沙门氏菌血清型表明需要加强监测，以防止这些生物的进一步传播。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

Complete genome and plasmid sequences of a multidrug-resistant Salmonella enterica subsp. enterica serovar Panama isolate from a German cattle farm.

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Complete genome and plasmid sequences of a multidrug-resistant Salmonella enterica subsp. enterica serovar Panama isolate from a German cattle farm.

We describe a rare isolate of Salmonella enterica subsp. enterica serovar Panama with an extended-spectrum β-lactamase (ESBL) profile from a German cattle-fattening farm. Applying two next-generation sequencing methods we generated sequences of the genome as well as the plasmids; assembled the draft genome sequence of Salmonella enterica subsp. enterica serovar Panama isolate 18PM0209. Antimicrobial resistance genes, virulence-associated genes and plasmids were analyzed using bioinformatics. Occurrence of multidrug-resistant Salmonella serovars at cattle-fattening farms indicate the need of enhanced surveillance to prevent further spread of these organisms.

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来源期刊

Journal of Genomics

自引率

0.00%

发文量

审稿时长

12 weeks

期刊介绍： Journal of Genomics publishes papers of high quality in all areas of gene, genetics, genomics, proteomics, metabolomics, DNA/RNA, computational biology, bioinformatics, and other relevant areas of research and application. Articles published by the journal are rigorously peer-reviewed. Types of articles include: Research paper, Short research communication, Review or mini-reviews, Commentary, Database, Software.