来自回肠和肝脏转录组对骆驼高盐和缺水条件的抗性的证据。

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Accounts of Chemical Research Pub Date : 2020-06-05 eCollection Date: 2020-01-01 DOI:10.1186/s40851-020-00159-3
Dong Zhang, Jing Pan, Huanmin Zhou, Yu Cao
{"title":"来自回肠和肝脏转录组对骆驼高盐和缺水条件的抗性的证据。","authors":"Dong Zhang,&nbsp;Jing Pan,&nbsp;Huanmin Zhou,&nbsp;Yu Cao","doi":"10.1186/s40851-020-00159-3","DOIUrl":null,"url":null,"abstract":"<p><p>Camels have evolved various resistance characteristics adaptive to their desert habitats. In the present study, we used high-throughput sequencing to investigate stress-induced alternative splicing events as well as different genes involved in resistance to water deprivation and salt absorption in the ileum and liver in <i>Camelus bactrianus</i>. Through association analyses of mRNA, miRNA and lncRNA, we sought to explicate how camels respond to high salt and water scarcity conditions. There were two modes by which genes driven by alternative splicing were enriched to molecular functions, invoking of which was potentially fixed by organ and stress types. With qRT-PCR detection, the differentially expressed <i>MUC6</i>, <i>AQP5</i>, <i>LOC105076960</i>, <i>PKP4</i>, <i>CDH11</i>, <i>TENM1, SDS</i>, <i>LOC105061856</i>, <i>PLIN2</i> and <i>UPP2</i> were screened as functionally important genes, along with miR-29b, miR-484, miR-362-5p, miR-96, miR-195, miR-128 and miR-148a. These genes contributed to cellular stress resistance, for instance by reducing water loss, inhibiting excessive import of sodium, improving protective barriers and sodium ion homeostasis, and maintaining uridine content. The underlying competing endogenous RNAs referred to LNC001664, let-7e and <i>LOC105076960</i> mRNA in ileum, and LNC001438, LNC003417, LNC001770, miR-199c and <i>TENM1</i> mRNA in liver. Besides competent interpretation to resistance, there may be inspirations for curing human diseases triggered by high-salt intake.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2020-06-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40851-020-00159-3","citationCount":"2","resultStr":"{\"title\":\"Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel.\",\"authors\":\"Dong Zhang,&nbsp;Jing Pan,&nbsp;Huanmin Zhou,&nbsp;Yu Cao\",\"doi\":\"10.1186/s40851-020-00159-3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Camels have evolved various resistance characteristics adaptive to their desert habitats. In the present study, we used high-throughput sequencing to investigate stress-induced alternative splicing events as well as different genes involved in resistance to water deprivation and salt absorption in the ileum and liver in <i>Camelus bactrianus</i>. Through association analyses of mRNA, miRNA and lncRNA, we sought to explicate how camels respond to high salt and water scarcity conditions. There were two modes by which genes driven by alternative splicing were enriched to molecular functions, invoking of which was potentially fixed by organ and stress types. With qRT-PCR detection, the differentially expressed <i>MUC6</i>, <i>AQP5</i>, <i>LOC105076960</i>, <i>PKP4</i>, <i>CDH11</i>, <i>TENM1, SDS</i>, <i>LOC105061856</i>, <i>PLIN2</i> and <i>UPP2</i> were screened as functionally important genes, along with miR-29b, miR-484, miR-362-5p, miR-96, miR-195, miR-128 and miR-148a. These genes contributed to cellular stress resistance, for instance by reducing water loss, inhibiting excessive import of sodium, improving protective barriers and sodium ion homeostasis, and maintaining uridine content. The underlying competing endogenous RNAs referred to LNC001664, let-7e and <i>LOC105076960</i> mRNA in ileum, and LNC001438, LNC003417, LNC001770, miR-199c and <i>TENM1</i> mRNA in liver. Besides competent interpretation to resistance, there may be inspirations for curing human diseases triggered by high-salt intake.</p>\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2020-06-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1186/s40851-020-00159-3\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1186/s40851-020-00159-3\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2020/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1186/s40851-020-00159-3","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2020/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 2

摘要

骆驼已经进化出适应沙漠栖息地的各种抵抗特性。在本研究中,我们利用高通量测序技术研究了驼鹿(Camelus bactrianus)回肠和肝脏中应激诱导的选择性剪接事件以及参与抵抗水分剥夺和盐吸收的不同基因。通过mRNA、miRNA和lncRNA的关联分析,我们试图解释骆驼对高盐和缺水条件的反应。由选择性剪接驱动的基因通过两种模式被富集为分子功能,其调用可能被器官和应激类型所固定。通过qRT-PCR检测,筛选差异表达MUC6、AQP5、LOC105076960、PKP4、CDH11、TENM1、SDS、LOC105061856、PLIN2和UPP2为功能重要基因,以及miR-29b、miR-484、miR-362-5p、miR-96、miR-195、miR-128和miR-148a。这些基因有助于细胞抗逆性,例如通过减少水分流失,抑制钠的过度进口,改善保护屏障和钠离子稳态,以及维持尿苷含量。潜在的竞争内源性rna包括回肠中的LNC001664、let-7e和LOC105076960 mRNA,肝脏中的LNC001438、LNC003417、LNC001770、miR-199c和TENM1 mRNA。除了对耐药性的合理解释外,这可能对治疗高盐摄入引发的人类疾病有启发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Evidence from ileum and liver transcriptomes of resistance to high-salt and water-deprivation conditions in camel.

Camels have evolved various resistance characteristics adaptive to their desert habitats. In the present study, we used high-throughput sequencing to investigate stress-induced alternative splicing events as well as different genes involved in resistance to water deprivation and salt absorption in the ileum and liver in Camelus bactrianus. Through association analyses of mRNA, miRNA and lncRNA, we sought to explicate how camels respond to high salt and water scarcity conditions. There were two modes by which genes driven by alternative splicing were enriched to molecular functions, invoking of which was potentially fixed by organ and stress types. With qRT-PCR detection, the differentially expressed MUC6, AQP5, LOC105076960, PKP4, CDH11, TENM1, SDS, LOC105061856, PLIN2 and UPP2 were screened as functionally important genes, along with miR-29b, miR-484, miR-362-5p, miR-96, miR-195, miR-128 and miR-148a. These genes contributed to cellular stress resistance, for instance by reducing water loss, inhibiting excessive import of sodium, improving protective barriers and sodium ion homeostasis, and maintaining uridine content. The underlying competing endogenous RNAs referred to LNC001664, let-7e and LOC105076960 mRNA in ileum, and LNC001438, LNC003417, LNC001770, miR-199c and TENM1 mRNA in liver. Besides competent interpretation to resistance, there may be inspirations for curing human diseases triggered by high-salt intake.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信