GlycoBIST:一种在尖端使用毫微珠阵列对目标蛋白进行自动糖谱分析的系统

Q1 Biochemistry, Genetics and Molecular Biology
Hiroko Shimazaki, Ayaka Ono, Masako Tsuruga, Aya Ueki, Shiori Koseki-Kuno, Takako Toyoda, Kozue Saito, Kazumi Sawakami, Minoru Kariya, Osamu Segawa, Kazuhiro Nakamura, Michinori Koizuka, Atsushi Kuno
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引用次数: 2

摘要

凝集素是一种识别特定部分聚糖的生物分子,因此被广泛用作糖蛋白分析的探针。由于凝集素在自然界中广泛存在,加上近二十年来微阵列技术的进步,凝集素的多重使用已被广泛用于内源性蛋白质的聚糖谱分析。由于蛋白质糖基化被认为具有重要的生物学意义,有望成为一种可靠的疾病标志物,因此凝集素微阵列分析已被用于发现与疾病相关的糖基化改变。然而,传统的系统仅限于研究目的;因此,它的实施在临床设置是必要的。在这里,我们使用GlycoBIST提供了一种自动聚糖分析方法。一种独特的阵列格式用于10-plexed凝集素-糖蛋白相互作用分析1毫米大小的珠子,这些珠子垂直排列在一个毛细血管形状的塑料尖端。使用一盒式自动移液机,整个过程(包括相互作用、洗涤和检测)自动连续进行,从而产生可重复的测量结果。本文介绍了纯化糖蛋白的一种典型的聚糖谱分析方法和GlycoBIST尖端的制备。©2020 by John Wiley &基本方案1:制作GlycoBIST探针基本方案2:使用GlycoBIST自动分析目标糖蛋白
本文章由计算机程序翻译,如有差异,请以英文原文为准。
GlycoBIST: A System for Automatic Glycan Profiling of a Target Protein Using Milli-Bead Array in a Tip

Lectin is a biomolecule that recognizes a specific part of glycans and, thus, has been used widely as a probe for glycoprotein analysis. Owing to the wide repertoire in nature combined with the recent two decades of advances in microarray technology, the multiplexed use of lectins has been widely used for glycan profiling of endogenous proteins. Because protein glycosylation is recognized as being biologically important and is expected to be a reliable disease marker, lectin microarray analysis with highly sensitive detection has been used to discover disease-relevant glycosylation alterations. However, the conventional system is limited to research purposes; thus, its implementation in clinical settings is warranted. Here, we provide an automatic glycan profiling method using GlycoBIST. A unique array format is used for 10-plexed lectin–glycoprotein interaction analysis on 1-mm-sized beads, which are arranged vertically in a capillary-shaped plastic tip. Using a one-boxed autopipetting machine, the whole process (including interaction, washing, and detection) is performed automatically and serially, resulting in reproducible measurements. In this article, a typical method for glycan profiling of a purified glycoprotein and the fabrication of GlycoBIST tips is explained. © 2020 by John Wiley & Sons, Inc.

Basic Protocol 1: Fabrication of a GlycoBIST tip

Basic Protocol 2: Automatic profiling of a target glycoprotein using GlycoBIST

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来源期刊
Current Protocols in Protein Science
Current Protocols in Protein Science Biochemistry, Genetics and Molecular Biology-Biochemistry
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期刊介绍: With the mapping of the human genome, more and more researchers are exploring protein structures and functions in living organisms. Current Protocols in Protein Science provides protein scientists, biochemists, molecular biologists, geneticists, and others with the first comprehensive suite of protocols for this growing field.
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