在转录组的支持下,对Richtersius coronifer进行了新的重新描述,为描述单型Richtersius属(Eutardigrada)内隐藏的物种多样性提供了资源。

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Accounts of Chemical Research Pub Date : 2020-02-05 eCollection Date: 2020-01-01 DOI:10.1186/s40851-020-0154-y
Daniel Stec, Łukasz Krzywański, Kazuharu Arakawa, Łukasz Michalczyk
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引用次数: 0

摘要

Richtersius coronifer是Richtersiidae科的标称种,也是一种流行的实验室模型,它体现了现代沙蜥分类学中的一个常见问题。尽管该领域取得了不可否认的进步,但许多陈旧和不完整的类群描述阻碍了物种的划分以及对物种多样性和分布的估计。尽管一个多世纪以来,世界各地都有该物种的记录,但最近的研究表明,迄今为止的记录很可能代表的是一个物种复合体,而不是一个单一的世界性物种。然而,为了识别和命名复合体中的物种多样性,首先需要对标称物种进行综合的重新描述。在此,我们描述了从斯匹次卑尔根(即原始描述中提到的两个产地之一)采集到的一个 R. coronifer 种群,并提供了与四个标准遗传标记(18S rRNA、28S rRNA、ITS-2 和 COI)的标准 DNA 序列相关的详细形态学和形态计量学数据,以及转录组测序的支持。我们建议替换 1981 年由 Maucci 和 Ramazzotti 指定的新模式,因为无法验证现有的新模式是否与 1903 年和 1904 年由 Richters 研究的标本同种。最后,利用新近从斯匹次卑尔根、意大利、波兰和希腊的种群中获得的细胞色素 c 氧化酶亚单位 I(COI)序列以及 GenBank 中保存的序列(中国、格陵兰岛、意大利、蒙古),我们进行了遗传物种划分,结果表明,除标称类群外,里希特斯属中还有 7 个不同的潜在物种。这项研究为进一步研究该属的分类和物种多样性提供了一个起点。此外,这项工作有可能成为第一个同时提供相关物种的遗传条形码和转录组的重新描述。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A new redescription of <i>Richtersius coronifer</i>, supported by transcriptome, provides resources for describing concealed species diversity within the monotypic genus <i>Richtersius</i> (Eutardigrada).

A new redescription of <i>Richtersius coronifer</i>, supported by transcriptome, provides resources for describing concealed species diversity within the monotypic genus <i>Richtersius</i> (Eutardigrada).

A new redescription of <i>Richtersius coronifer</i>, supported by transcriptome, provides resources for describing concealed species diversity within the monotypic genus <i>Richtersius</i> (Eutardigrada).

A new redescription of Richtersius coronifer, supported by transcriptome, provides resources for describing concealed species diversity within the monotypic genus Richtersius (Eutardigrada).

Richtersius coronifer, the nominal species for the family Richtersiidae and a popular laboratory model, exemplifies a common problem in modern tardigrade taxonomy. Despite undeniable progress in the field, many old and incomplete descriptions of taxa hinder both species delimitation and the estimation of species diversity and distribution. Although for over a century this species has been recorded throughout the world, recent research indicates that records to date are likely to represent a species complex rather than a single cosmopolitan species. However, in order to recognise and name species diversity within the complex, an integrative redescription of the nominal species is first needed. Here, we describe an R. coronifer population collected from Spitsbergen, i.e., one of the two localities mentioned in the original description, with detailed morphological and morphometric data associated with standard DNA sequences of four standard genetic markers (18S rRNA, 28S rRNA, ITS-2, and COI) and supported by transcriptome sequencing. We propose replacement of the neotype designated in 1981 by Maucci and Ramazzotti, as it is impossible to verify whether the existing neotype is conspecific with specimens studied by Richters in 1903 and 1904. Finally, using newly obtained cytochrome c oxidase subunit I (COI) sequences of populations from Spitsbergen, Italy, Poland, and Greece together with sequences deposited in GenBank (China, Greenland, Italy, Mongolia), we performed genetic species delimitation, which indicated seven distinct potential species within the genus Richtersius, in addition to the nominal taxon. This study marks a starting point for further research on the taxonomy of and species diversity within the genus. Moreover, this work has the potential to be the first tardigrade redescription to provide both genetic barcodes and a transcriptome of the species in question.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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