实时荧光定量pcr阵列从血浆中分离MicroRNA。

Current Protocols in Human Genetics Pub Date : 2018-10-01 Epub Date: 2018-09-14 DOI:10.1002/cphg.69
Isabel Witvrouwen, Andreas B Gevaert, Emeline M Van Craenenbroeck, Amaryllis H Van Craenenbroeck
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引用次数: 3

摘要

MicroRNAs是一种短的非编码rna,通过mRNA降解或抑制翻译在转录后水平调节基因表达。它们在血浆中的稳定性使它们成为有吸引力的生物标志物。由于存在许多血浆microRNA分离方法,并且产量可能变化很大,因此我们最近使用mirVana PARIS试剂盒(Thermo Fisher Scientific)优化了microRNA分离和预扩增程序,以便在血浆样品中使用TaqMan低密度阵列进行microRNA定量。这里的方法是由赛默飞世尔提供的原始程序略有修改。根据我们的研究结果,建议如下:(1)使用拟南芥(Ath) miR-159a作为峰值对照,(2)在RNA分离期间使用100µl洗脱体积,(3)在不稀释预扩增产物的情况下添加预扩增步骤。在这篇文章中,我们提供了一步一步的microRNA分离和定量程序,使用TaqMan低密度阵列的人血浆样本。©2018 by John Wiley & Sons, Inc。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
MicroRNA Isolation from Plasma for Real-Time qPCR Array.

MicroRNAs are short non-coding RNAs that regulate gene expression at the post-transcriptional level by mRNA degradation or suppression of translation. Their stability in plasma makes them attractive biomarkers. Since many plasma microRNA isolation procedures exist and the yield can be highly variable, we recently optimized the microRNA isolation and preamplification procedure using the mirVana PARIS kit (Thermo Fisher Scientific) for miRNA quantification with TaqMan Low Density Arrays in plasma samples. The method here is slightly modified from the original procedure supplied by Thermo Fisher. Based on our findings, recommendations are the following: (1) use Arabidopsis thaliana (Ath) miR-159a as spike-in control, (2) use a 100-µl elution volume during RNA isolation, and (3) add a preamplification step without dilution of the preamplification product. In this article we provide a step-by-step microRNA isolation and quantification procedure using human plasma samples for TaqMan Low Density Arrays. © 2018 by John Wiley & Sons, Inc.

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来源期刊
Current Protocols in Human Genetics
Current Protocols in Human Genetics Biochemistry, Genetics and Molecular Biology-Genetics
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期刊介绍: Current Protocols in Human Genetics is the resource for designing and running successful research projects in all branches of human genetics.
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