{"title":"台湾地区深度脑出血与氧化磷酸化相关基因的关系。","authors":"Yi-Chun Chen, Chiung-Mei Chen, Yun-Shien Lee, Kuo-Hsuan Chang","doi":"10.1177/1179069518794517","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Pathway analysis demonstrated associations between deep intracerebral hemorrhage (DICH) and the genetic risk score of complex IV of the oxidative phosphorylation (OXPHOS) pathway in whites. This study investigated the related genetic variations in the DICH population in Taiwan. Candidate variants were selected from the prior report by the following criteria: (1) nuclear genes encoding mitochondria complex IV, (2) genetic effect >1.08, (3) global minor allele frequency >0.01. Six single-nucleotide polymorphisms fitted in the selection criteria, which were mainly involved in Cox assembly, including Cox10, Cox15, and Cox18, and one structural gene, Cox7C. Associations were tested with adjustment of multiple covariables. Permutation testing of 1000 replicates was performed for empirical estimates.</p><p><strong>Results: </strong>This study enrolled 336 patients and 379 controls. Compared with whites, the Taiwan population has higher minor allele frequency (MAF) of rs4308511, rs767844, and rs221592 and lower MAF of rs8079640. There was no variation of rs16949067 in the Taiwan population. When adjusting for the traditional risk factors, rs221592 G allele was associated with DICH risk in women under additive (odds ratio (OR) = 1.5, 95% confidence interval (CI) = 1.02-2.3, <i>P</i> = .04) and recessive models (OR = 2.9, 95% CI = 1.2-6.9, <i>P</i> = .013). In an additive fashion, a poor 30-day outcome was associated with rs4308511 T allele (OR = 1.6, 95% CI = 1.1-2.3, <i>P</i> = .014) and rs9891372 C allele (OR = 1.7, 95% CI = 1.05-2.8, <i>P</i> = .024) in all subjects and in men (rs4308511, OR = 1.8, 95% CI = 1.2-2.7, <i>P</i> = .008; rs9891372, OR = 2.1, 95% CI = 1.1-3.8, <i>P</i> = .02).</p><p><strong>Conclusions: </strong>The results showed ethnic disparities in the complex IV-related genes. COX18-rs221592 G allele was associated with female DICH risks. COX7C-rs4308511 T allele was an independent risk of poor outcome in men.</p>","PeriodicalId":15817,"journal":{"name":"Journal of Experimental Neuroscience","volume":"12 ","pages":"1179069518794517"},"PeriodicalIF":0.0000,"publicationDate":"2018-08-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1177/1179069518794517","citationCount":"1","resultStr":"{\"title\":\"Associations of Oxidative Phosphorylation-Related Genes With Deep Intracerebral Hemorrhage in Taiwan.\",\"authors\":\"Yi-Chun Chen, Chiung-Mei Chen, Yun-Shien Lee, Kuo-Hsuan Chang\",\"doi\":\"10.1177/1179069518794517\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Pathway analysis demonstrated associations between deep intracerebral hemorrhage (DICH) and the genetic risk score of complex IV of the oxidative phosphorylation (OXPHOS) pathway in whites. This study investigated the related genetic variations in the DICH population in Taiwan. Candidate variants were selected from the prior report by the following criteria: (1) nuclear genes encoding mitochondria complex IV, (2) genetic effect >1.08, (3) global minor allele frequency >0.01. Six single-nucleotide polymorphisms fitted in the selection criteria, which were mainly involved in Cox assembly, including Cox10, Cox15, and Cox18, and one structural gene, Cox7C. Associations were tested with adjustment of multiple covariables. Permutation testing of 1000 replicates was performed for empirical estimates.</p><p><strong>Results: </strong>This study enrolled 336 patients and 379 controls. Compared with whites, the Taiwan population has higher minor allele frequency (MAF) of rs4308511, rs767844, and rs221592 and lower MAF of rs8079640. There was no variation of rs16949067 in the Taiwan population. When adjusting for the traditional risk factors, rs221592 G allele was associated with DICH risk in women under additive (odds ratio (OR) = 1.5, 95% confidence interval (CI) = 1.02-2.3, <i>P</i> = .04) and recessive models (OR = 2.9, 95% CI = 1.2-6.9, <i>P</i> = .013). In an additive fashion, a poor 30-day outcome was associated with rs4308511 T allele (OR = 1.6, 95% CI = 1.1-2.3, <i>P</i> = .014) and rs9891372 C allele (OR = 1.7, 95% CI = 1.05-2.8, <i>P</i> = .024) in all subjects and in men (rs4308511, OR = 1.8, 95% CI = 1.2-2.7, <i>P</i> = .008; rs9891372, OR = 2.1, 95% CI = 1.1-3.8, <i>P</i> = .02).</p><p><strong>Conclusions: </strong>The results showed ethnic disparities in the complex IV-related genes. COX18-rs221592 G allele was associated with female DICH risks. COX7C-rs4308511 T allele was an independent risk of poor outcome in men.</p>\",\"PeriodicalId\":15817,\"journal\":{\"name\":\"Journal of Experimental Neuroscience\",\"volume\":\"12 \",\"pages\":\"1179069518794517\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2018-08-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1177/1179069518794517\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Experimental Neuroscience\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1177/1179069518794517\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2018/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Experimental Neuroscience","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1177/1179069518794517","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2018/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1
摘要
背景:通路分析表明,白人深度脑出血(DICH)与氧化磷酸化(OXPHOS)通路复合物IV的遗传风险评分之间存在关联。本研究调查台湾地区DICH人群的相关遗传变异。候选变异的选择标准为:(1)编码线粒体复合体IV的核基因,(2)遗传效应>1.08,(3)全局次要等位基因频率>0.01。6个单核苷酸多态性符合选择标准,主要涉及Cox组装,包括Cox10、Cox15和Cox18,以及一个结构基因Cox7C。通过调整多个协变量来检验相关性。对1000个重复进行排列检验进行经验估计。结果:本研究纳入336例患者和379例对照。与白人相比,台湾人群rs4308511、rs767844和rs221592的次要等位基因频率(MAF)较高,rs8079640的次要等位基因频率(MAF)较低。rs16949067在台湾人群中无变异。在校正传统危险因素后,rs221592 G等位基因在加性模型(优势比(OR) = 1.5, 95%可信区间(CI) = 1.02-2.3, P = 0.04)和隐性模型(OR = 2.9, 95% CI = 1.2-6.9, P = 0.013)下与女性DICH风险相关。在加性分析中,所有受试者和男性(rs4308511, OR = 1.8, 95% CI = 1.2-2.7, P = 0.008)的30天不良预后与rs4308511 T等位基因(OR = 1.6, 95% CI = 1.1-2.3, P = 0.014)和rs9891372 C等位基因(OR = 1.7, 95% CI = 1.05-2.8, P = 0.024)相关;rs9891372, OR = 2.1, 95% CI = 1.1 ~ 3.8, P = 0.02)。结论:复合体iv相关基因存在民族差异。COX18-rs221592 G等位基因与女性DICH风险相关。cox7c - rs4308511t等位基因是男性不良预后的独立风险因素。
Associations of Oxidative Phosphorylation-Related Genes With Deep Intracerebral Hemorrhage in Taiwan.
Background: Pathway analysis demonstrated associations between deep intracerebral hemorrhage (DICH) and the genetic risk score of complex IV of the oxidative phosphorylation (OXPHOS) pathway in whites. This study investigated the related genetic variations in the DICH population in Taiwan. Candidate variants were selected from the prior report by the following criteria: (1) nuclear genes encoding mitochondria complex IV, (2) genetic effect >1.08, (3) global minor allele frequency >0.01. Six single-nucleotide polymorphisms fitted in the selection criteria, which were mainly involved in Cox assembly, including Cox10, Cox15, and Cox18, and one structural gene, Cox7C. Associations were tested with adjustment of multiple covariables. Permutation testing of 1000 replicates was performed for empirical estimates.
Results: This study enrolled 336 patients and 379 controls. Compared with whites, the Taiwan population has higher minor allele frequency (MAF) of rs4308511, rs767844, and rs221592 and lower MAF of rs8079640. There was no variation of rs16949067 in the Taiwan population. When adjusting for the traditional risk factors, rs221592 G allele was associated with DICH risk in women under additive (odds ratio (OR) = 1.5, 95% confidence interval (CI) = 1.02-2.3, P = .04) and recessive models (OR = 2.9, 95% CI = 1.2-6.9, P = .013). In an additive fashion, a poor 30-day outcome was associated with rs4308511 T allele (OR = 1.6, 95% CI = 1.1-2.3, P = .014) and rs9891372 C allele (OR = 1.7, 95% CI = 1.05-2.8, P = .024) in all subjects and in men (rs4308511, OR = 1.8, 95% CI = 1.2-2.7, P = .008; rs9891372, OR = 2.1, 95% CI = 1.1-3.8, P = .02).
Conclusions: The results showed ethnic disparities in the complex IV-related genes. COX18-rs221592 G allele was associated with female DICH risks. COX7C-rs4308511 T allele was an independent risk of poor outcome in men.